G418189


Basic Information

Item Value
gene id G418189
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 56841426 ~ 56845422 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU473985
TGTGCTAGCTTTCTGGCTGCCGTGCTCATTGAAGGCCTCACACTGGTAGAGAGCAGAGTCTGCTAGCAGGGcagaggagagggtgaaggaggtggaggagccGTTGTGGGACTGGAGCTTTACATCCTGGTCCTCAGAGAGTCTCCTCAGCACCATCCATCCCACTGGAGCGCCGTCCGACAGGCAGGACACCGTCACGCTCTCCCCTTCCTTCACCTCACTGGCTGGGCTCACTCTACATCCTGGTCCTCAGAGAGTCTCCTCAGCACCATCCGTCCCACCGGAGCTCCGTCTGACAGGCAAGACACCGTCACGTTCTCCCCTTCTTTCACCTTACTGGCTGGGCTTACTTTGATGGAGGTGTTTGTTGGGGGAGCTTCAACAATGACGTTCACGCTGGCTGTGATGTTTCCAATGGTGTTGCTTGCCACACACTCATATTGACCAGAATCCACCAGTGTCATCTCTGTAAGGACAAGCTCCTCGCTCTGCCCTACTATGACAGCCTGTCCGTGTGGACCAATGGTCTTCCACTGTATCTCTGGTCTGGGGTTCCCTTCAGCATGGCACATCAATGTGGGACTGGAACCAACTCTCACAACAGTCAACTCAGATATTGACGTAATCTGTG

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU473985 True 631 lncRNA 0.55 3 56841426 56845422

Neighbor

gene id symbol gene type direction distance location
dph5 LOC106613590 coding upstream 52773 56779858 ~ 56788653 (+)
serpinc1 LOC106613587 coding upstream 139270 56696618 ~ 56702156 (+)
rc3h1a LOC106613585 coding upstream 152837 56658921 ~ 56688589 (+)
stil stil coding upstream 194336 56631796 ~ 56647090 (+)
LOC110524094 LOC106613581 coding upstream 248145 56585208 ~ 56593281 (+)
LOC100135807 LOC106613594 coding downstream 98421 56943838 ~ 56958165 (+)
LOC118964777 NA coding downstream 109902 56955324 ~ 56955462 (+)
LOC110524109 LOC106613599 coding downstream 170506 57015928 ~ 57037694 (+)
LOC118964761 NA coding downstream 180903 57026325 ~ 57026460 (+)
nwd1 nwd1 coding downstream 193695 57039117 ~ 57061390 (+)
G418190 NA non-coding upstream 643 56838520 ~ 56840783 (+)
G418188 NA non-coding upstream 4815 56836253 ~ 56836611 (+)
G418187 NA non-coding upstream 5369 56835767 ~ 56836057 (+)
G418184 NA non-coding upstream 7564 56833637 ~ 56833862 (+)
G418183 NA non-coding upstream 7846 56833376 ~ 56833580 (+)
G418193 LOC100526765 non-coding downstream 665 56846087 ~ 56847202 (+)
G418201 NA non-coding downstream 7632 56853054 ~ 56853399 (+)
G418210 NA non-coding downstream 18552 56863974 ~ 56864224 (+)
G418209 NA non-coding downstream 19067 56864489 ~ 56868205 (+)
G418264 NA non-coding downstream 96332 56941754 ~ 56941959 (+)
G418119 LOC106613588 other upstream 111605 56726185 ~ 56729821 (+)
G418077 LOC106613582 other upstream 212809 56617890 ~ 56628617 (+)
G416857 NA other upstream 1516155 55324645 ~ 55325271 (+)
G415946 NA other upstream 2228284 54590074 ~ 54613142 (+)
mutyh mutyh other upstream 2490811 54346481 ~ 54395448 (+)
G418251 rtca other downstream 78502 56923924 ~ 56925176 (+)
LOC110524119 LOC106613607 other downstream 519942 57352343 ~ 57367627 (+)
G419452 NA other downstream 1038958 57884380 ~ 57899648 (+)
G420117 LOC100846954 other downstream 1567701 58411240 ~ 58418268 (+)

Expression


Co-expression Network