G418193 (LOC100526765)


Basic Information

Item Value
gene id G418193
gene name LOC100526765
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 56846087 ~ 56847202 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU473990
ATTAAAGCATTAATAAACTATTTATGAATAAATTAGAATTTCATGTATTAGCATTTAAGCATGATAAGCATTACAATTCATAAGCATTCAGAATATTTATAACAATGAATAAAGAACCTATAAGCATGTATTATACATTTCTATTGGCTTATAACAATGGCTGATGATGGCTTATTCTGAATTAAGTTGATTGGACGTACAGTATACTTTGACAACCGCACGCTGTTGTTTGGTCGATTCTCCGCAACTGCCTTTGCAGAGAAGTGTGTCATCGTGTGCTGTCGACACAGGGTCAAAGACCGCCACTGATTCCGACCCGGAGGTGTGTATTTTCGCAAACACTGGCTTGTCCTCCAGCAAAGCCCAGGAGATGGTAACCTTTTCATTGCAATCCTTCACCGAGCATTGCAGCTCATGCCTATCACCGACTTTCAAAAGTGCATTCTTTGGTTTCAGCTCCATATGAAATGCAAATgCTGTTACTGGTAGTATCAATACCCATAACAGAATGAGATACATTTTTGTGTTGGATAGGCTGAATTAAAAAAAACTGTAAGGAACTGATTTGAGCTAGACTGTAACTTCCCTTGGTCCTGCTATGCTATGTGGGGATGATGGGTCTGGTCAGCCCAGAGTCCAGAGTCTGTGGATTTATAATTTGGAATAGGGAGGGATACCAacagggtaaaaaaataaaaatttaacACACCCCCTTACAATTCCAAGTATGTCACAGAGGAAGTACCCCACTCCTG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU473990 True 755 lncRNA 0.40 2 56846087 56847202

Neighbor

gene id symbol gene type direction distance location
dph5 LOC106613590 coding upstream 57434 56779858 ~ 56788653 (+)
serpinc1 LOC106613587 coding upstream 143931 56696618 ~ 56702156 (+)
rc3h1a LOC106613585 coding upstream 157498 56658921 ~ 56688589 (+)
stil stil coding upstream 198997 56631796 ~ 56647090 (+)
LOC110524094 LOC106613581 coding upstream 252806 56585208 ~ 56593281 (+)
LOC100135807 LOC106613594 coding downstream 96641 56943838 ~ 56958165 (+)
LOC118964777 NA coding downstream 108122 56955324 ~ 56955462 (+)
LOC110524109 LOC106613599 coding downstream 168726 57015928 ~ 57037694 (+)
LOC118964761 NA coding downstream 179123 57026325 ~ 57026460 (+)
nwd1 nwd1 coding downstream 191915 57039117 ~ 57061390 (+)
G418189 NA non-coding upstream 665 56841426 ~ 56845422 (+)
G418190 NA non-coding upstream 5304 56838520 ~ 56840783 (+)
G418188 NA non-coding upstream 9476 56836253 ~ 56836611 (+)
G418187 NA non-coding upstream 10030 56835767 ~ 56836057 (+)
G418184 NA non-coding upstream 12225 56833637 ~ 56833862 (+)
G418201 NA non-coding downstream 5852 56853054 ~ 56853399 (+)
G418210 NA non-coding downstream 16772 56863974 ~ 56864224 (+)
G418209 NA non-coding downstream 17287 56864489 ~ 56868205 (+)
G418264 NA non-coding downstream 94552 56941754 ~ 56941959 (+)
G418265 NA non-coding downstream 95223 56942425 ~ 56942665 (+)
G418119 LOC106613588 other upstream 116266 56726185 ~ 56729821 (+)
G418077 LOC106613582 other upstream 217470 56617890 ~ 56628617 (+)
G416857 NA other upstream 1520816 55324645 ~ 55325271 (+)
G415946 NA other upstream 2232945 54590074 ~ 54613142 (+)
mutyh mutyh other upstream 2495472 54346481 ~ 54395448 (+)
G418251 rtca other downstream 76722 56923924 ~ 56925176 (+)
LOC110524119 LOC106613607 other downstream 518162 57352343 ~ 57367627 (+)
G419452 NA other downstream 1037178 57884380 ~ 57899648 (+)
G420117 LOC100846954 other downstream 1565921 58411240 ~ 58418268 (+)

Expression


Co-expression Network