G418201


Basic Information

Item Value
gene id G418201
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 56853054 ~ 56853399 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU473998
gtactatggtgttgaatgctgagctttcgtcaatgaacagcattcctacataggtatttctcttgtccagatgggatagggcagtgtgcaggcgattgcattgtctgtggacctgttgaggcggtaagcaaattgaagtgggtctagggtggcaggtagggtGTAGGTAATATGATCCttcactagtctctcaaagcacttcatgattacagaagtgagtgctacggggcgatagtcatttaattcagttacctttgcattcttgggtacaggaacaatggtggccatcttgaagcatgtggggagaacagactgggatagggagagattgaatatgtcagtaaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU473998 True 346 lncRNA 0.46 1 56853054 56853399

Neighbor

gene id symbol gene type direction distance location
dph5 LOC106613590 coding upstream 64401 56779858 ~ 56788653 (+)
serpinc1 LOC106613587 coding upstream 150898 56696618 ~ 56702156 (+)
rc3h1a LOC106613585 coding upstream 164465 56658921 ~ 56688589 (+)
stil stil coding upstream 205964 56631796 ~ 56647090 (+)
LOC110524094 LOC106613581 coding upstream 259773 56585208 ~ 56593281 (+)
LOC100135807 LOC106613594 coding downstream 90444 56943838 ~ 56958165 (+)
LOC118964777 NA coding downstream 101925 56955324 ~ 56955462 (+)
LOC110524109 LOC106613599 coding downstream 162529 57015928 ~ 57037694 (+)
LOC118964761 NA coding downstream 172926 57026325 ~ 57026460 (+)
nwd1 nwd1 coding downstream 185718 57039117 ~ 57061390 (+)
G418193 LOC100526765 non-coding upstream 5852 56846087 ~ 56847202 (+)
G418189 NA non-coding upstream 7632 56841426 ~ 56845422 (+)
G418190 NA non-coding upstream 12271 56838520 ~ 56840783 (+)
G418188 NA non-coding upstream 16443 56836253 ~ 56836611 (+)
G418187 NA non-coding upstream 16997 56835767 ~ 56836057 (+)
G418210 NA non-coding downstream 10575 56863974 ~ 56864224 (+)
G418209 NA non-coding downstream 11090 56864489 ~ 56868205 (+)
G418264 NA non-coding downstream 88355 56941754 ~ 56941959 (+)
G418265 NA non-coding downstream 89026 56942425 ~ 56942665 (+)
G418252 NA non-coding downstream 110595 56963994 ~ 56965420 (+)
G418119 LOC106613588 other upstream 123233 56726185 ~ 56729821 (+)
G418077 LOC106613582 other upstream 224437 56617890 ~ 56628617 (+)
G416857 NA other upstream 1527783 55324645 ~ 55325271 (+)
G415946 NA other upstream 2239912 54590074 ~ 54613142 (+)
mutyh mutyh other upstream 2502439 54346481 ~ 54395448 (+)
G418251 rtca other downstream 70525 56923924 ~ 56925176 (+)
LOC110524119 LOC106613607 other downstream 511965 57352343 ~ 57367627 (+)
G419452 NA other downstream 1030981 57884380 ~ 57899648 (+)
G420117 LOC100846954 other downstream 1559724 58411240 ~ 58418268 (+)

Expression


Co-expression Network