G418895


Basic Information

Item Value
gene id G418895
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 56955569 ~ 56958154 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU474775
CTCAAatttattaaaacttgttttcaggATCCGCACAATATCAGAAACGGTGATTAAGTCAGACAGGCATTTCTCACACACCTTCAAATAGTACAATCTCCCTCAAATACAGAGACCACAGTACGCATTCCCAAAACCCTACACTAAGGTtatgttcgaatactcatactaaccgcacTATTTGTGACATAAATTGAGTAGGTAGTATACGGTATGTTAGTATGGTGTATTCGAACAAAGCTTAAGTGTTCACTTCCACCCATAACTTaatattttcctttttttttaaaaacatcatCAAACAGCAAGAAAAGCAGTAACACAAATTGATCAAACTAACAATTGGGGAACCATTGGCGTCTTTTATCCAGTAGCTGCTGacatcatacagtgccttcagaaagtattcataccccctgttttcactttgtcactgGGTATTgcatcaattgaatccattttgaattcaggctgtaacacaacaaaatgtggaataagtcagggggtatgaatactttgaaggcactgtagctgataTGAACACTAACAAGCGCATGTTGTGCAATGGTGCTTTCCATAGGGAATCACTAAACCGCACATTCTCTTGAAAATAGCTTTCTAGCATTGATGGAATGTGTGGGGCTGTAAGAAAACAAAAAGGTGCAAAGACATTTTTACAGGGTTATACAGTATTTCAGAAATACAACAGgtttactaaaaaaaaaaaaagttttccttCCAACATTCTGCTCTTCAGGAGAAAGCGCTACTGTTCATACCCATCCTATGTCAGTAAGGCAACCAGAAGAGAGCAAACAAACGAAGGCCACACACAAAGATAAAAACAGCCAGCAACTAGAGATTAGTTTCACAACGTTGAGTAGTAAGGGAACTTGTGGTGTCCGTGGCGTGTGCAGCCATCCATGTTCGGAGGAAGAAAGGTTTGGATGGCCAAGGGGTCAGGAGCAGTATGGTGACCAGTAACACCCAGTCAAAGTGACTACCCAAAGAGTCAGAGTACAGTAGACCAACTTCACATCATCATGGGGGCTGGTTTTGCGTCGCTGGGCTTGCGTCCAGGGGATGCAGGCCAGGGTACCGCATGCTCATTTCAGATCCAGGACCATAGAAGCCGGGTTCTCCAAGTAGTCCCTCCACAGGTTGGAAAACCGCGCCATGGTGGCCCCGTCGATGATCCGGTGGTCTGCCGACCAGCTGACGTTCATGACGTGAGCTTTCACCACCTCGTCCCTCGAGTTAAACCTGGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU474775 True 1268 lncRNA 0.43 2 56955569 56958154

Neighbor

gene id symbol gene type direction distance location
LOC110524106 LOC100195223 coding downstream 26369 56923916 ~ 56929200 (-)
cdc14ab LOC106613592 coding downstream 41913 56864450 ~ 56913656 (-)
gpr88 LOC106613990 coding downstream 93253 56860615 ~ 56862316 (-)
LOC100136253 LOC100526765 coding downstream 113122 56838507 ~ 56842447 (-)
LOC110524101 LOC106613589 coding downstream 138504 56789633 ~ 56817065 (-)
LOC110524107 LOC106613595 coding upstream 5824 56963978 ~ 56973388 (-)
LOC110524108 LOC106613596 coding upstream 26852 56985006 ~ 57002024 (-)
LOC110524111 LOC106613601 coding upstream 49495 57007649 ~ 57011401 (-)
LOC110524110 LOC106613600 coding upstream 53468 57011622 ~ 57015940 (-)
apc2 apc2 coding upstream 120421 57078575 ~ 57114865 (-)
G418892 NA non-coding downstream 1639 56953552 ~ 56953930 (-)
G418872 LOC100194703 non-coding downstream 22875 56932302 ~ 56932694 (-)
G418867 NA non-coding downstream 39909 56915445 ~ 56915660 (-)
G418839 NA non-coding downstream 96818 56858549 ~ 56858751 (-)
G418836 NA non-coding downstream 97077 56858258 ~ 56858492 (-)
G418908 NA non-coding upstream 24496 56982650 ~ 56982872 (-)
G418910 NA non-coding upstream 25284 56983438 ~ 56984664 (-)
G418890 LOC106613599 non-coding upstream 64064 57022218 ~ 57037688 (-)
G418932 NA non-coding upstream 82458 57040612 ~ 57040846 (-)
G418927 NA non-coding upstream 117197 57075351 ~ 57076065 (-)
G418830 NA other downstream 120974 56834026 ~ 56834595 (-)
LOC110522975 LOC106613586 other downstream 244185 56703896 ~ 56711499 (-)
G417527 NA other downstream 1345839 55608835 ~ 55609730 (-)
LOC110524071 LOC106613554 other downstream 1795302 55123617 ~ 55181458 (-)
G416110 NA other downstream 2569341 54363286 ~ 54392411 (-)
G419603 NA other upstream 652905 57611059 ~ 57611567 (-)
LOC110524128 LOC107602773 other upstream 661900 57612040 ~ 57627128 (-)
G419714 NA other upstream 741591 57699745 ~ 57705936 (-)
G420193 NA other upstream 1154233 58112387 ~ 58114060 (-)
G420421 NA other upstream 1454974 58413128 ~ 58414143 (-)

Expression


Co-expression Network