G418970



Basic Information


Item Value
gene id G418970
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 57115003 ~ 57115204 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU474858
CCCGCACTTCCACGCACACGTTTTAAGTTTAAGTTAAAGTTCAGGCTTTGCTGACCATTCTTTACGCCGAAAGTCTGAACTAAATCATTTTAACCCATATGGCTATGTTTACTGCATTCATGCTTTGTAGAGTTTCTAAAGTTTCCATTGAATGCAGCCTATGCAATACATTAAGAAATAGACATTGGCTAGAGGTCAAACG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU474858 True 202 lncRNA 0.39 1 57115003 57115204

Neighbor


gene id symbol gene type direction distance location
apc2 apc2 coding downstream 138 57078575 ~ 57114865 (-)
LOC110524110 LOC106613600 coding downstream 99063 57011622 ~ 57015940 (-)
LOC110524111 LOC106613601 coding downstream 103602 57007649 ~ 57011401 (-)
LOC110524108 LOC106613596 coding downstream 112979 56985006 ~ 57002024 (-)
LOC110524107 LOC106613595 coding downstream 141615 56963978 ~ 56973388 (-)
LOC110524120 LOC106613608 coding upstream 233766 57348970 ~ 57351000 (-)
LOC110524122 LOC106613611 coding upstream 328972 57444176 ~ 57459501 (-)
LOC110524123 LOC106613612 coding upstream 344960 57460164 ~ 57537912 (-)
plppr3b LOC106613613 coding upstream 471681 57586885 ~ 57605528 (-)
LOC110524128 LOC107602773 coding upstream 496836 57612040 ~ 57627128 (-)
G418927 NA non-coding downstream 38938 57075351 ~ 57076065 (-)
G418932 NA non-coding downstream 74157 57040612 ~ 57040846 (-)
G418890 LOC106613599 non-coding downstream 77315 57022218 ~ 57037688 (-)
G418910 NA non-coding downstream 130339 56983438 ~ 56984664 (-)
G418908 NA non-coding downstream 132131 56982650 ~ 56982872 (-)
G418971 NA non-coding upstream 706 57115910 ~ 57116208 (-)
G418982 NA non-coding upstream 22640 57137844 ~ 57138085 (-)
G418993 NA non-coding upstream 37599 57152803 ~ 57153012 (-)
G419006 NA non-coding upstream 51130 57166334 ~ 57166578 (-)
G419039 NA non-coding upstream 97196 57212400 ~ 57250554 (-)
G418830 NA other downstream 280408 56834026 ~ 56834595 (-)
LOC110522975 LOC106613586 other downstream 403619 56703896 ~ 56711499 (-)
G417527 NA other downstream 1505273 55608835 ~ 55609730 (-)
LOC110524071 LOC106613554 other downstream 1954736 55123617 ~ 55181458 (-)
G416110 NA other downstream 2728775 54363286 ~ 54392411 (-)
G419603 NA other upstream 495855 57611059 ~ 57611567 (-)
G419714 NA other upstream 584541 57699745 ~ 57705936 (-)
G420193 NA other upstream 997183 58112387 ~ 58114060 (-)
G420421 NA other upstream 1297924 58413128 ~ 58414143 (-)

Expression



Co-expression Network