G418379


Basic Information

Item Value
gene id G418379
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 57142981 ~ 57143200 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU474195
acagtgaaataatctgtctgtaaacaattgctggaaaaattacttgtgtcatgcgcaaagtagatgtcctgaccgacttgccaaaactatagtttgttaacaagacatttgtggagtggttgaaaaatgttaagtatatgtaaacttccgacttcaactgtattgctcatctcatatgcatttaatgtattctataccatctactgtatcttgcctatgc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU474195 True 220 lncRNA 0.35 1 57142981 57143200

Neighbor

gene id symbol gene type direction distance location
diras1a LOC106613605 coding upstream 9320 57116340 ~ 57133661 (+)
c5h19orf25 cssa10h19orf25 coding upstream 64694 57076800 ~ 57078287 (+)
LOC110524113 LOC106613602 coding upstream 68252 57064912 ~ 57074729 (+)
nwd1 nwd1 coding upstream 81591 57039117 ~ 57061390 (+)
LOC110524109 LOC106613599 coding upstream 105287 57015928 ~ 57037694 (+)
LOC110524118 NA coding downstream 57556 57200756 ~ 57264453 (+)
LOC110524119 LOC106613607 coding downstream 209143 57352343 ~ 57367627 (+)
LOC110524121 LOC106613609 coding downstream 236897 57380097 ~ 57427323 (+)
tmem259 LOC106613615 coding downstream 484105 57627305 ~ 57641111 (+)
LOC118964626 LOC106595063 coding downstream 698722 57841922 ~ 57851518 (+)
G418323 NA non-coding upstream 103040 57039736 ~ 57039941 (+)
G418295 LOC106613600 non-coding upstream 127810 57013617 ~ 57015171 (+)
G418297 NA non-coding upstream 131917 57010186 ~ 57011064 (+)
G418252 NA non-coding upstream 177561 56963994 ~ 56965420 (+)
G418265 NA non-coding upstream 200316 56942425 ~ 56942665 (+)
G418399 NA non-coding downstream 27035 57170235 ~ 57170470 (+)
G418428 NA non-coding downstream 84654 57227854 ~ 57231401 (+)
G419132 LOC106573930 non-coding downstream 206865 57350065 ~ 57350974 (+)
G419135 NA non-coding downstream 214789 57357989 ~ 57358207 (+)
G419159 NA non-coding downstream 236124 57379324 ~ 57379533 (+)
LOC100135807 LOC106613594 other upstream 184816 56943838 ~ 56958165 (+)
G418251 rtca other upstream 217805 56923924 ~ 56925176 (+)
G418119 LOC106613588 other upstream 413160 56726185 ~ 56729821 (+)
G418077 LOC106613582 other upstream 514364 56617890 ~ 56628617 (+)
G416857 NA other upstream 1817710 55324645 ~ 55325271 (+)
G419452 NA other downstream 741180 57884380 ~ 57899648 (+)
G420117 LOC100846954 other downstream 1269923 58411240 ~ 58418268 (+)
G420634 NA other downstream 1799528 58942728 ~ 58944217 (+)
LOC110524226 LOC106573564 other downstream 3551057 60694220 ~ 60695905 (+)

Expression


Co-expression Network