G418993



Basic Information


Item Value
gene id G418993
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 57152803 ~ 57153012 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU474881
ggtcagttttacaaggatatgtttggcagcatgagtgaaggatgatttgtttgtgaaataggaagccaattctagatttaactttggattggagatgtttgatgtgagtctggaaggagagttaacagtctaaccagacacctaggtatttgtagttgtccacatattcagaaccgtccagagtagtcatgctggacaggcgggcaggtg

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU474881 True 210 lncRNA 0.43 1 57152803 57153012
Loading

Neighbor


gene id symbol gene type direction distance location
apc2 apc2 coding downstream 37938 57078575 ~ 57114865 (-)
LOC110524110 LOC106613600 coding downstream 136863 57011622 ~ 57015940 (-)
LOC110524111 LOC106613601 coding downstream 141402 57007649 ~ 57011401 (-)
LOC110524108 LOC106613596 coding downstream 150779 56985006 ~ 57002024 (-)
LOC110524107 LOC106613595 coding downstream 179415 56963978 ~ 56973388 (-)
LOC110524120 LOC106613608 coding upstream 195958 57348970 ~ 57351000 (-)
LOC110524122 LOC106613611 coding upstream 291164 57444176 ~ 57459501 (-)
LOC110524123 LOC106613612 coding upstream 307152 57460164 ~ 57537912 (-)
plppr3b LOC106613613 coding upstream 433873 57586885 ~ 57605528 (-)
LOC110524128 LOC107602773 coding upstream 459028 57612040 ~ 57627128 (-)
G418982 NA non-coding downstream 14718 57137844 ~ 57138085 (-)
G418971 NA non-coding downstream 36595 57115910 ~ 57116208 (-)
G418970 NA non-coding downstream 37599 57115003 ~ 57115204 (-)
G418927 NA non-coding downstream 76738 57075351 ~ 57076065 (-)
G418932 NA non-coding downstream 111957 57040612 ~ 57040846 (-)
G419006 NA non-coding upstream 13322 57166334 ~ 57166578 (-)
G419039 NA non-coding upstream 59388 57212400 ~ 57250554 (-)
G419056 NA non-coding upstream 93545 57246557 ~ 57254755 (-)
G419116 NA non-coding upstream 181610 57334622 ~ 57334959 (-)
G419117 NA non-coding upstream 182358 57335370 ~ 57335571 (-)
G418830 NA other downstream 318208 56834026 ~ 56834595 (-)
LOC110522975 LOC106613586 other downstream 441419 56703896 ~ 56711499 (-)
G417527 NA other downstream 1543073 55608835 ~ 55609730 (-)
LOC110524071 LOC106613554 other downstream 1992536 55123617 ~ 55181458 (-)
G416110 NA other downstream 2766575 54363286 ~ 54392411 (-)
G419603 NA other upstream 458047 57611059 ~ 57611567 (-)
G419714 NA other upstream 546733 57699745 ~ 57705936 (-)
G420193 NA other upstream 959375 58112387 ~ 58114060 (-)
G420421 NA other upstream 1260116 58413128 ~ 58414143 (-)

Expression


G418993 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 4.
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G418993 Expression in each Bioproject

Bar chart with 14 bars.
G418993 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 50.
End of interactive chart.

Co-expression Network