G419056


Basic Information

Item Value
gene id G419056
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 57246557 ~ 57254755 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU474950
ttgggcgtgcaaaattattcagcccccttaagttaatactttgtagcgccaccttttgctgcgattacagctgtaagtcgcttggggtatgtctctatcagttgtGCACATCGAgtgactgaaattttttcccattcctccttgcaaaacagctcgagcccagtgaggttggatggagagcatttgtgaacagcagttttcagttctttccacagattctcgattggattcatgtctggactttgacttggccattctaacacctggatatgtttatttttgaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaagacaaatctccgtcccagtctcaggtcttttgcagactccatcaggttttcttcctgaatggtcctgtatttggctccatccatcttcccatcaattttaaccatctgaaccatgctgaagaaaagcaggcccaaaccatgatgctgccaccaccatgtttgacagtggggatggtgtgttcagctgtgttgcttttacgccaaacataacgttttgcattgt

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU474950 True 558 lncRNA 0.44 2 57246557 57254755

Neighbor

gene id symbol gene type direction distance location
apc2 apc2 coding downstream 131692 57078575 ~ 57114865 (-)
LOC110524110 LOC106613600 coding downstream 230617 57011622 ~ 57015940 (-)
LOC110524111 LOC106613601 coding downstream 235156 57007649 ~ 57011401 (-)
LOC110524108 LOC106613596 coding downstream 244533 56985006 ~ 57002024 (-)
LOC110524107 LOC106613595 coding downstream 273169 56963978 ~ 56973388 (-)
LOC110524120 LOC106613608 coding upstream 94215 57348970 ~ 57351000 (-)
LOC110524122 LOC106613611 coding upstream 189421 57444176 ~ 57459501 (-)
LOC110524123 LOC106613612 coding upstream 205409 57460164 ~ 57537912 (-)
plppr3b LOC106613613 coding upstream 332130 57586885 ~ 57605528 (-)
LOC110524128 LOC107602773 coding upstream 357285 57612040 ~ 57627128 (-)
G419006 NA non-coding downstream 79979 57166334 ~ 57166578 (-)
G418993 NA non-coding downstream 93545 57152803 ~ 57153012 (-)
G418982 NA non-coding downstream 108472 57137844 ~ 57138085 (-)
G418971 NA non-coding downstream 130349 57115910 ~ 57116208 (-)
G418970 NA non-coding downstream 131353 57115003 ~ 57115204 (-)
G419116 NA non-coding upstream 79867 57334622 ~ 57334959 (-)
G419117 NA non-coding upstream 80615 57335370 ~ 57335571 (-)
G419125 NA non-coding upstream 88859 57343614 ~ 57343930 (-)
G419140 NA non-coding upstream 99193 57353948 ~ 57354150 (-)
G419143 NA non-coding upstream 103573 57358328 ~ 57358619 (-)
G418830 NA other downstream 411962 56834026 ~ 56834595 (-)
LOC110522975 LOC106613586 other downstream 535173 56703896 ~ 56711499 (-)
G417527 NA other downstream 1636827 55608835 ~ 55609730 (-)
LOC110524071 LOC106613554 other downstream 2086290 55123617 ~ 55181458 (-)
G416110 NA other downstream 2860329 54363286 ~ 54392411 (-)
G419603 NA other upstream 356304 57611059 ~ 57611567 (-)
G419714 NA other upstream 444990 57699745 ~ 57705936 (-)
G420193 NA other upstream 857632 58112387 ~ 58114060 (-)
G420421 NA other upstream 1158373 58413128 ~ 58414143 (-)

Expression


Co-expression Network