Gene
RNA
| Item | Value |
|---|---|
| gene id | G419132 |
| gene name | LOC106573930 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 57350065 ~ 57350974 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| growth arrest and DNA damage-inducible protein GADD45 beta-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU475028 | True | 726 | lncRNA | 0.45 | 2 | 57350065 | 57350974 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524118 | NA | coding | upstream | 85612 | 57200756 ~ 57264453 (+) |
| diras1a | LOC106613605 | coding | upstream | 216404 | 57116340 ~ 57133661 (+) |
| c5h19orf25 | cssa10h19orf25 | coding | upstream | 271778 | 57076800 ~ 57078287 (+) |
| LOC110524113 | LOC106613602 | coding | upstream | 275336 | 57064912 ~ 57074729 (+) |
| nwd1 | nwd1 | coding | upstream | 288675 | 57039117 ~ 57061390 (+) |
| LOC110524119 | LOC106613607 | coding | downstream | 1369 | 57352343 ~ 57367627 (+) |
| LOC110524121 | LOC106613609 | coding | downstream | 29123 | 57380097 ~ 57427323 (+) |
| tmem259 | LOC106613615 | coding | downstream | 276331 | 57627305 ~ 57641111 (+) |
| LOC118964626 | LOC106595063 | coding | downstream | 490948 | 57841922 ~ 57851518 (+) |
| LOC110524134 | NA | coding | downstream | 523831 | 57874805 ~ 57906660 (+) |
| G418428 | NA | non-coding | upstream | 118664 | 57227854 ~ 57231401 (+) |
| G418399 | NA | non-coding | upstream | 179595 | 57170235 ~ 57170470 (+) |
| G418379 | NA | non-coding | upstream | 206865 | 57142981 ~ 57143200 (+) |
| G418323 | NA | non-coding | upstream | 310124 | 57039736 ~ 57039941 (+) |
| G418295 | LOC106613600 | non-coding | upstream | 334894 | 57013617 ~ 57015171 (+) |
| G419135 | NA | non-coding | downstream | 7015 | 57357989 ~ 57358207 (+) |
| G419159 | NA | non-coding | downstream | 28350 | 57379324 ~ 57379533 (+) |
| G419276 | NA | non-coding | downstream | 254607 | 57605581 ~ 57609228 (+) |
| G419278 | NA | non-coding | downstream | 259809 | 57610783 ~ 57611756 (+) |
| G419300 | NA | non-coding | downstream | 302190 | 57653164 ~ 57653374 (+) |
| LOC100135807 | LOC106613594 | other | upstream | 391900 | 56943838 ~ 56958165 (+) |
| G418251 | rtca | other | upstream | 424889 | 56923924 ~ 56925176 (+) |
| G418119 | LOC106613588 | other | upstream | 620244 | 56726185 ~ 56729821 (+) |
| G418077 | LOC106613582 | other | upstream | 721448 | 56617890 ~ 56628617 (+) |
| G416857 | NA | other | upstream | 2024794 | 55324645 ~ 55325271 (+) |
| G419452 | NA | other | downstream | 533406 | 57884380 ~ 57899648 (+) |
| G420117 | LOC100846954 | other | downstream | 1062149 | 58411240 ~ 58418268 (+) |
| G420634 | NA | other | downstream | 1591754 | 58942728 ~ 58944217 (+) |
| LOC110524226 | LOC106573564 | other | downstream | 3343283 | 60694220 ~ 60695905 (+) |
