Gene
RNA
| Item | Value |
|---|---|
| gene id | G419144 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 57359854 ~ 57360178 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| survival of motor neuron protein-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU475040 | True | 325 | lncRNA | 0.50 | 1 | 57359854 | 57360178 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524120 | LOC106613608 | coding | downstream | 8854 | 57348970 ~ 57351000 (-) |
| apc2 | apc2 | coding | downstream | 244989 | 57078575 ~ 57114865 (-) |
| LOC110524110 | LOC106613600 | coding | downstream | 343914 | 57011622 ~ 57015940 (-) |
| LOC110524111 | LOC106613601 | coding | downstream | 348453 | 57007649 ~ 57011401 (-) |
| LOC110524108 | LOC106613596 | coding | downstream | 357830 | 56985006 ~ 57002024 (-) |
| LOC110524122 | LOC106613611 | coding | upstream | 83998 | 57444176 ~ 57459501 (-) |
| LOC110524123 | LOC106613612 | coding | upstream | 99986 | 57460164 ~ 57537912 (-) |
| plppr3b | LOC106613613 | coding | upstream | 226707 | 57586885 ~ 57605528 (-) |
| LOC110524128 | LOC107602773 | coding | upstream | 251862 | 57612040 ~ 57627128 (-) |
| grin3bb | LOC106613616 | coding | upstream | 281042 | 57641220 ~ 57750792 (-) |
| G419143 | NA | non-coding | downstream | 1235 | 57358328 ~ 57358619 (-) |
| G419140 | NA | non-coding | downstream | 5704 | 57353948 ~ 57354150 (-) |
| G419125 | NA | non-coding | downstream | 15924 | 57343614 ~ 57343930 (-) |
| G419117 | NA | non-coding | downstream | 24283 | 57335370 ~ 57335571 (-) |
| G419116 | NA | non-coding | downstream | 24895 | 57334622 ~ 57334959 (-) |
| G419145 | LOC106613607 | non-coding | upstream | 178 | 57360356 ~ 57361105 (-) |
| G419147 | NA | non-coding | upstream | 1829 | 57362007 ~ 57362528 (-) |
| G419149 | NA | non-coding | upstream | 8312 | 57368490 ~ 57368727 (-) |
| G419526 | NA | non-coding | upstream | 18873 | 57379051 ~ 57379359 (-) |
| G418830 | NA | other | downstream | 525259 | 56834026 ~ 56834595 (-) |
| LOC110522975 | LOC106613586 | other | downstream | 648470 | 56703896 ~ 56711499 (-) |
| G417527 | NA | other | downstream | 1750124 | 55608835 ~ 55609730 (-) |
| LOC110524071 | LOC106613554 | other | downstream | 2199587 | 55123617 ~ 55181458 (-) |
| G416110 | NA | other | downstream | 2973626 | 54363286 ~ 54392411 (-) |
| G419603 | NA | other | upstream | 250881 | 57611059 ~ 57611567 (-) |
| G419714 | NA | other | upstream | 339567 | 57699745 ~ 57705936 (-) |
| G420193 | NA | other | upstream | 752209 | 58112387 ~ 58114060 (-) |
| G420421 | NA | other | upstream | 1052950 | 58413128 ~ 58414143 (-) |
