Gene
RNA
| Item | Value |
|---|---|
| gene id | G419687 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 57661325 ~ 57661537 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-interacting protein 1-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU475629 | True | 213 | lncRNA | 0.34 | 1 | 57661325 | 57661537 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524128 | LOC107602773 | coding | downstream | 34197 | 57612040 ~ 57627128 (-) |
| plppr3b | LOC106613613 | coding | downstream | 55797 | 57586885 ~ 57605528 (-) |
| LOC110524123 | LOC106613612 | coding | downstream | 123413 | 57460164 ~ 57537912 (-) |
| LOC110524122 | LOC106613611 | coding | downstream | 201824 | 57444176 ~ 57459501 (-) |
| LOC110524120 | LOC106613608 | coding | downstream | 310325 | 57348970 ~ 57351000 (-) |
| wdr18 | LOC106613619 | coding | upstream | 110099 | 57771636 ~ 57862459 (-) |
| LOC110524131 | LOC106613618 | coding | upstream | 205025 | 57866562 ~ 57874864 (-) |
| LOC110524132 | LOC106613620 | coding | upstream | 214791 | 57876328 ~ 57881714 (-) |
| LOC110524135 | arrdc2 | coding | upstream | 328208 | 57989745 ~ 57998440 (-) |
| LOC110522874 | NA | coding | upstream | 341047 | 58002584 ~ 58014660 (-) |
| G419673 | LOC106613615 | non-coding | downstream | 20224 | 57638288 ~ 57641101 (-) |
| G419526 | NA | non-coding | downstream | 281966 | 57379051 ~ 57379359 (-) |
| G419149 | NA | non-coding | downstream | 292598 | 57368490 ~ 57368727 (-) |
| G419147 | NA | non-coding | downstream | 298797 | 57362007 ~ 57362528 (-) |
| G419702 | NA | non-coding | upstream | 21794 | 57683331 ~ 57683565 (-) |
| G419712 | NA | non-coding | upstream | 32402 | 57693939 ~ 57694248 (-) |
| G419719 | NA | non-coding | upstream | 44840 | 57706377 ~ 57706695 (-) |
| G419726 | NA | non-coding | upstream | 54998 | 57716535 ~ 57716753 (-) |
| G419736 | NA | non-coding | upstream | 64056 | 57725593 ~ 57725885 (-) |
| G419603 | NA | other | downstream | 49758 | 57611059 ~ 57611567 (-) |
| G418830 | NA | other | downstream | 826730 | 56834026 ~ 56834595 (-) |
| LOC110522975 | LOC106613586 | other | downstream | 949941 | 56703896 ~ 56711499 (-) |
| G417527 | NA | other | downstream | 2051595 | 55608835 ~ 55609730 (-) |
| G419714 | NA | other | upstream | 38208 | 57699745 ~ 57705936 (-) |
| G420193 | NA | other | upstream | 450850 | 58112387 ~ 58114060 (-) |
| G420421 | NA | other | upstream | 751591 | 58413128 ~ 58414143 (-) |
| G420982 | LOC106613655 | other | upstream | 1364566 | 59026103 ~ 59036299 (-) |
| lsg1 | lsg1 | other | upstream | 1471333 | 59131152 ~ 59138429 (-) |
