G419357


Basic Information

Item Value
gene id G419357
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 57734199 ~ 57734530 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU475279
ttgtccttgtcaacactcccacctgtgttaatgagagaatcactgaaaTTATGTCAGctagtccttttgtggcagggctgaaatgcagggGAAATGTTTTTtgtggattcagttcatttgcatggcaaagagggactttgcaatgaattgcaattcatctgatcactcttcataacattctggagtatatgcaaattgccatcatacaaactgaggcagcagactctgtgaaaattaatatttgtgtcattctcaaaccttttggccacgactgtagatttaatcttttttattgtgttattgactctatgcttgtttattccatgtgtaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU475279 True 332 lncRNA 0.38 1 57734199 57734530

Neighbor

gene id symbol gene type direction distance location
tmem259 LOC106613615 coding upstream 93088 57627305 ~ 57641111 (+)
LOC110524121 LOC106613609 coding upstream 306876 57380097 ~ 57427323 (+)
LOC110524119 LOC106613607 coding upstream 366572 57352343 ~ 57367627 (+)
LOC110524118 NA coding upstream 469746 57200756 ~ 57264453 (+)
diras1a LOC106613605 coding upstream 600538 57116340 ~ 57133661 (+)
LOC118964626 LOC106595063 coding downstream 107392 57841922 ~ 57851518 (+)
LOC110524134 NA coding downstream 140275 57874805 ~ 57906660 (+)
sid1 NA coding downstream 167572 57902102 ~ 57903229 (+)
LOC110524136 LOC100136537 coding downstream 294231 58028761 ~ 58030894 (+)
LOC110522977 NA coding downstream 350191 58084721 ~ 58086269 (+)
G419345 NA non-coding upstream 21573 57712414 ~ 57712626 (+)
G419338 NA non-coding upstream 34160 57699765 ~ 57700039 (+)
G419326 NA non-coding upstream 46129 57687831 ~ 57688070 (+)
G419307 NA non-coding upstream 73896 57660091 ~ 57660303 (+)
G419301 NA non-coding upstream 78389 57655591 ~ 57655810 (+)
G419380 NA non-coding downstream 37118 57771648 ~ 57773938 (+)
G419448 NA non-coding downstream 129268 57863798 ~ 57864930 (+)
G419449 NA non-coding downstream 130676 57865206 ~ 57884145 (+)
G419459 NA non-coding downstream 162866 57897396 ~ 57900379 (+)
G419901 NA non-coding downstream 251166 57985696 ~ 57985937 (+)
LOC100135807 LOC106613594 other upstream 776034 56943838 ~ 56958165 (+)
G418251 rtca other upstream 809023 56923924 ~ 56925176 (+)
G418119 LOC106613588 other upstream 1004378 56726185 ~ 56729821 (+)
G418077 LOC106613582 other upstream 1105582 56617890 ~ 56628617 (+)
G419452 NA other downstream 149850 57884380 ~ 57899648 (+)
G420117 LOC100846954 other downstream 678593 58411240 ~ 58418268 (+)
G420634 NA other downstream 1208198 58942728 ~ 58944217 (+)
LOC110524226 LOC106573564 other downstream 2959727 60694220 ~ 60695905 (+)
G423922 NA other downstream 3987007 61721537 ~ 61722024 (+)

Expression


Co-expression Network