G419815



Basic Information


Item Value
gene id G419815
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 57841853 ~ 57851937 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU475760
tctttctcaacaaaaaaaaggtggttggtttttctttggattttctcctaccctatctattgtgttatattctcctacttTATttgaacatttctacaaacttcaaggattttctttccaatggtaccaattctatgcatattctggcttcagggcctgagcaacaggcagtttactttggacacgtcattcaggtggaaattgagaaaaatggggcctagccctaagaagttt

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU475760 True 234 lncRNA 0.38 2 57841853 57851937

Neighbor


gene id symbol gene type direction distance location
grin3bb LOC106613616 coding downstream 91061 57641220 ~ 57750792 (-)
LOC110524128 LOC107602773 coding downstream 214725 57612040 ~ 57627128 (-)
plppr3b LOC106613613 coding downstream 236325 57586885 ~ 57605528 (-)
LOC110524123 LOC106613612 coding downstream 303941 57460164 ~ 57537912 (-)
LOC110524122 LOC106613611 coding downstream 382352 57444176 ~ 57459501 (-)
LOC110524131 LOC106613618 coding upstream 14625 57866562 ~ 57874864 (-)
LOC110524132 LOC106613620 coding upstream 24391 57876328 ~ 57881714 (-)
LOC110524135 arrdc2 coding upstream 137808 57989745 ~ 57998440 (-)
LOC110522874 NA coding upstream 150647 58002584 ~ 58014660 (-)
homer3b LOC106613626 coding upstream 181735 58033672 ~ 58081875 (-)
G419736 NA non-coding downstream 115968 57725593 ~ 57725885 (-)
G419726 NA non-coding downstream 125100 57716535 ~ 57716753 (-)
G419719 NA non-coding downstream 135158 57706377 ~ 57706695 (-)
G419712 NA non-coding downstream 147605 57693939 ~ 57694248 (-)
G419702 NA non-coding downstream 158288 57683331 ~ 57683565 (-)
G419834 NA non-coding upstream 48350 57900287 ~ 57933416 (-)
G419900 NA non-coding upstream 133287 57985224 ~ 57985552 (-)
G420184 NA non-coding upstream 170349 58022286 ~ 58022803 (-)
G420194 NA non-coding upstream 177034 58028971 ~ 58030854 (-)
G420179 NA non-coding upstream 180184 58032121 ~ 58083723 (-)
G419714 NA other downstream 135917 57699745 ~ 57705936 (-)
G419603 NA other downstream 230286 57611059 ~ 57611567 (-)
G418830 NA other downstream 1007258 56834026 ~ 56834595 (-)
LOC110522975 LOC106613586 other downstream 1130469 56703896 ~ 56711499 (-)
G420193 NA other upstream 260450 58112387 ~ 58114060 (-)
G420421 NA other upstream 561191 58413128 ~ 58414143 (-)
G420982 LOC106613655 other upstream 1174166 59026103 ~ 59036299 (-)
lsg1 lsg1 other upstream 1280933 59131152 ~ 59138429 (-)
G422347 NA other upstream 2248828 60100765 ~ 60101056 (-)

Expression



Co-expression Network