G419449


Basic Information

Item Value
gene id G419449
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 57865206 ~ 57884145 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU475374
tcagttttgcacatcgagagactgacattttttcccattcctccttgcaaaacagctcgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttcttcccacagattctcgattggattcaggtctggactttgacttggccattctaacacctggatatgtttatttttgaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaagacaaatctccgtcccagtctcaggtcttttgcagactccatcaggttttcttccagaatggtcctgtatttggctccatccatcttcccatctattttaaccatcttccc

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU475374 True 349 lncRNA 0.42 2 57865206 57884145

Neighbor

gene id symbol gene type direction distance location
LOC118964626 LOC106595063 coding upstream 13688 57841922 ~ 57851518 (+)
tmem259 LOC106613615 coding upstream 224095 57627305 ~ 57641111 (+)
LOC110524121 LOC106613609 coding upstream 437883 57380097 ~ 57427323 (+)
LOC110524119 LOC106613607 coding upstream 497579 57352343 ~ 57367627 (+)
LOC110524118 NA coding upstream 600753 57200756 ~ 57264453 (+)
sid1 NA coding downstream 17957 57902102 ~ 57903229 (+)
LOC110524136 LOC100136537 coding downstream 144616 58028761 ~ 58030894 (+)
LOC110522977 NA coding downstream 200576 58084721 ~ 58086269 (+)
LOC110524139 lsm4 coding downstream 235920 58120065 ~ 58124398 (+)
LOC110524140 LOC106613630 coding downstream 274376 58158521 ~ 58160134 (+)
G419448 NA non-coding upstream 276 57863798 ~ 57864930 (+)
G419380 NA non-coding upstream 91268 57771648 ~ 57773938 (+)
G419357 NA non-coding upstream 130676 57734199 ~ 57734530 (+)
G419345 NA non-coding upstream 152580 57712414 ~ 57712626 (+)
G419338 NA non-coding upstream 165167 57699765 ~ 57700039 (+)
G419459 NA non-coding downstream 13251 57897396 ~ 57900379 (+)
G419901 NA non-coding downstream 101551 57985696 ~ 57985937 (+)
G419927 NA non-coding downstream 149290 58033435 ~ 58035576 (+)
G419971 NA non-coding downstream 202414 58086559 ~ 58086794 (+)
G419980 NA non-coding downstream 203521 58087666 ~ 58087897 (+)
LOC100135807 LOC106613594 other upstream 907041 56943838 ~ 56958165 (+)
G418251 rtca other upstream 940030 56923924 ~ 56925176 (+)
G418119 LOC106613588 other upstream 1135385 56726185 ~ 56729821 (+)
G418077 LOC106613582 other upstream 1236589 56617890 ~ 56628617 (+)
G419452 NA other downstream 235 57884380 ~ 57899648 (+)
G420117 LOC100846954 other downstream 528978 58411240 ~ 58418268 (+)
G420634 NA other downstream 1058583 58942728 ~ 58944217 (+)
LOC110524226 LOC106573564 other downstream 2810112 60694220 ~ 60695905 (+)
G423922 NA other downstream 3837392 61721537 ~ 61722024 (+)

Expression


Co-expression Network