Gene
RNA
| Item | Value |
|---|---|
| gene id | G419452 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 57884380 ~ 57899648 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU475377 | True | 638 | TUCP | 0.45 | 2 | 57884380 | 57899648 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118964626 | LOC106595063 | coding | upstream | 32862 | 57841922 ~ 57851518 (+) |
| tmem259 | LOC106613615 | coding | upstream | 243269 | 57627305 ~ 57641111 (+) |
| LOC110524121 | LOC106613609 | coding | upstream | 457057 | 57380097 ~ 57427323 (+) |
| LOC110524119 | LOC106613607 | coding | upstream | 516753 | 57352343 ~ 57367627 (+) |
| LOC110524118 | NA | coding | upstream | 619927 | 57200756 ~ 57264453 (+) |
| sid1 | NA | coding | downstream | 2454 | 57902102 ~ 57903229 (+) |
| LOC110524136 | LOC100136537 | coding | downstream | 129113 | 58028761 ~ 58030894 (+) |
| LOC110522977 | NA | coding | downstream | 185073 | 58084721 ~ 58086269 (+) |
| LOC110524139 | lsm4 | coding | downstream | 220417 | 58120065 ~ 58124398 (+) |
| LOC110524140 | LOC106613630 | coding | downstream | 258873 | 58158521 ~ 58160134 (+) |
| G419449 | NA | non-coding | upstream | 235 | 57865206 ~ 57884145 (+) |
| G419448 | NA | non-coding | upstream | 19450 | 57863798 ~ 57864930 (+) |
| G419380 | NA | non-coding | upstream | 110442 | 57771648 ~ 57773938 (+) |
| G419357 | NA | non-coding | upstream | 149850 | 57734199 ~ 57734530 (+) |
| G419345 | NA | non-coding | upstream | 171754 | 57712414 ~ 57712626 (+) |
| G419901 | NA | non-coding | downstream | 86048 | 57985696 ~ 57985937 (+) |
| G419927 | NA | non-coding | downstream | 133787 | 58033435 ~ 58035576 (+) |
| G419971 | NA | non-coding | downstream | 186911 | 58086559 ~ 58086794 (+) |
| G419980 | NA | non-coding | downstream | 188018 | 58087666 ~ 58087897 (+) |
| G419979 | NA | non-coding | downstream | 190048 | 58089696 ~ 58089817 (+) |
| LOC100135807 | LOC106613594 | other | upstream | 926215 | 56943838 ~ 56958165 (+) |
| G418251 | rtca | other | upstream | 959204 | 56923924 ~ 56925176 (+) |
| G418119 | LOC106613588 | other | upstream | 1154559 | 56726185 ~ 56729821 (+) |
| G418077 | LOC106613582 | other | upstream | 1255763 | 56617890 ~ 56628617 (+) |
| G420117 | LOC100846954 | other | downstream | 513475 | 58411240 ~ 58418268 (+) |
| G420634 | NA | other | downstream | 1043080 | 58942728 ~ 58944217 (+) |
| LOC110524226 | LOC106573564 | other | downstream | 2794609 | 60694220 ~ 60695905 (+) |
| G423922 | NA | other | downstream | 3821889 | 61721537 ~ 61722024 (+) |
| G424079 | NA | other | downstream | 4205875 | 62105523 ~ 62105872 (+) |
