G419459


Basic Information

Item Value
gene id G419459
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 57897396 ~ 57900379 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU475384
taatgtgcagaagatgaatgtgcaagtagagataatggggtgcaaaggagcaagataaataactaaatacagtatggggatgaggtagattgcatgggctatttacagatgggctatgtacatgtgcagtgatctgtgagctggtgcttaaagctagtgagggtggtaagagtctccagctttagtgatttttttatagtttgttccagtcattggcagcagagaactggaaggagaggcggccgaaGGaagggggctgaataattttgcacgcccaatttttcagtttttgatttgttaaaaaagtttgaaatatccaataaatgt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU475384 True 327 lncRNA 0.40 2 57897396 57900379

Neighbor

gene id symbol gene type direction distance location
LOC118964626 LOC106595063 coding upstream 45878 57841922 ~ 57851518 (+)
tmem259 LOC106613615 coding upstream 256285 57627305 ~ 57641111 (+)
LOC110524121 LOC106613609 coding upstream 470073 57380097 ~ 57427323 (+)
LOC110524119 LOC106613607 coding upstream 529769 57352343 ~ 57367627 (+)
LOC110524118 NA coding upstream 632943 57200756 ~ 57264453 (+)
sid1 NA coding downstream 1723 57902102 ~ 57903229 (+)
LOC110524136 LOC100136537 coding downstream 128382 58028761 ~ 58030894 (+)
LOC110522977 NA coding downstream 184342 58084721 ~ 58086269 (+)
LOC110524139 lsm4 coding downstream 219686 58120065 ~ 58124398 (+)
LOC110524140 LOC106613630 coding downstream 258142 58158521 ~ 58160134 (+)
G419449 NA non-coding upstream 13251 57865206 ~ 57884145 (+)
G419448 NA non-coding upstream 32466 57863798 ~ 57864930 (+)
G419380 NA non-coding upstream 123458 57771648 ~ 57773938 (+)
G419357 NA non-coding upstream 162866 57734199 ~ 57734530 (+)
G419345 NA non-coding upstream 184770 57712414 ~ 57712626 (+)
G419901 NA non-coding downstream 85317 57985696 ~ 57985937 (+)
G419927 NA non-coding downstream 133056 58033435 ~ 58035576 (+)
G419971 NA non-coding downstream 186180 58086559 ~ 58086794 (+)
G419980 NA non-coding downstream 187287 58087666 ~ 58087897 (+)
G419979 NA non-coding downstream 189317 58089696 ~ 58089817 (+)
LOC100135807 LOC106613594 other upstream 939231 56943838 ~ 56958165 (+)
G418251 rtca other upstream 972220 56923924 ~ 56925176 (+)
G418119 LOC106613588 other upstream 1167575 56726185 ~ 56729821 (+)
G418077 LOC106613582 other upstream 1268779 56617890 ~ 56628617 (+)
G420117 LOC100846954 other downstream 512744 58411240 ~ 58418268 (+)
G420634 NA other downstream 1042349 58942728 ~ 58944217 (+)
LOC110524226 LOC106573564 other downstream 2793878 60694220 ~ 60695905 (+)
G423922 NA other downstream 3821158 61721537 ~ 61722024 (+)
G424079 NA other downstream 4205144 62105523 ~ 62105872 (+)

Expression


Co-expression Network