G419979


Basic Information

Item Value
gene id G419979
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 58089696 ~ 58089817 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU475931
GGTGCAACATGTTTCATAATCTGTAAATGCCAAATAAATGGCAAAATCACTTTCTCAATCCTCAAACCCTTTGACATATAAGCAACCTTTGCTTCTGTTTCACAAGAGAGGAATCATCAGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU475931 True 122 lncRNA 0.38 1 58089696 58089817

Neighbor

gene id symbol gene type direction distance location
LOC110522977 NA coding upstream 3427 58084721 ~ 58086269 (+)
LOC110524136 LOC100136537 coding upstream 58802 58028761 ~ 58030894 (+)
LOC110524134 NA coding upstream 183036 57874805 ~ 57906660 (+)
sid1 NA coding upstream 186467 57902102 ~ 57903229 (+)
LOC118964626 LOC106595063 coding upstream 238178 57841922 ~ 57851518 (+)
LOC110524139 lsm4 coding downstream 30248 58120065 ~ 58124398 (+)
LOC110524140 LOC106613630 coding downstream 68704 58158521 ~ 58160134 (+)
LOC110524142 NA coding downstream 109570 58199387 ~ 58205370 (+)
LOC110524143 LOC106573897 coding downstream 222515 58312332 ~ 58370090 (+)
LOC118964627 NA coding downstream 311612 58401429 ~ 58404889 (+)
G419980 NA non-coding upstream 1799 58087666 ~ 58087897 (+)
G419971 NA non-coding upstream 2902 58086559 ~ 58086794 (+)
G419927 NA non-coding upstream 54120 58033435 ~ 58035576 (+)
G419901 NA non-coding upstream 103759 57985696 ~ 57985937 (+)
G419459 NA non-coding upstream 189317 57897396 ~ 57900379 (+)
G419976 NA non-coding downstream 176 58089993 ~ 58090475 (+)
G419986 LOC106613627 non-coding downstream 15298 58105115 ~ 58106945 (+)
G419989 NA non-coding downstream 19849 58109666 ~ 58111526 (+)
G419975 NA non-coding downstream 34852 58124669 ~ 58124739 (+)
G419995 NA non-coding downstream 52072 58141889 ~ 58142108 (+)
G419452 NA other upstream 190048 57884380 ~ 57899648 (+)
LOC110524119 LOC106613607 other upstream 722359 57352343 ~ 57367627 (+)
LOC100135807 LOC106613594 other upstream 1131531 56943838 ~ 56958165 (+)
G418251 rtca other upstream 1164520 56923924 ~ 56925176 (+)
G418119 LOC106613588 other upstream 1359875 56726185 ~ 56729821 (+)
G420117 LOC100846954 other downstream 323306 58411240 ~ 58418268 (+)
G420634 NA other downstream 852911 58942728 ~ 58944217 (+)
LOC110524226 LOC106573564 other downstream 2604440 60694220 ~ 60695905 (+)
G423922 NA other downstream 3631720 61721537 ~ 61722024 (+)
G424079 NA other downstream 4015706 62105523 ~ 62105872 (+)

Expression


Co-expression Network