Gene
RNA
| Item | Value |
|---|---|
| gene id | G420055 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 58245990 ~ 58246538 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| isoaspartyl peptidase/L-asparaginase isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU476025 | True | 549 | lncRNA | 0.37 | 1 | 58245990 | 58246538 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524142 | NA | coding | upstream | 40620 | 58199387 ~ 58205370 (+) |
| LOC110524140 | LOC106613630 | coding | upstream | 85856 | 58158521 ~ 58160134 (+) |
| LOC110524139 | lsm4 | coding | upstream | 121592 | 58120065 ~ 58124398 (+) |
| LOC110522977 | NA | coding | upstream | 159721 | 58084721 ~ 58086269 (+) |
| LOC110524136 | LOC100136537 | coding | upstream | 215096 | 58028761 ~ 58030894 (+) |
| LOC110524143 | LOC106573897 | coding | downstream | 65794 | 58312332 ~ 58370090 (+) |
| LOC118964627 | NA | coding | downstream | 154891 | 58401429 ~ 58404889 (+) |
| LOC118964530 | NA | coding | downstream | 234399 | 58480937 ~ 58482309 (+) |
| LOC110524147 | LOC106613637 | coding | downstream | 237505 | 58484043 ~ 58493673 (+) |
| LOC110524149 | LOC106613638 | coding | downstream | 253567 | 58500105 ~ 58505933 (+) |
| G420026 | NA | non-coding | upstream | 35880 | 58205864 ~ 58210110 (+) |
| G419999 | NA | non-coding | upstream | 92150 | 58151976 ~ 58153840 (+) |
| G419995 | NA | non-coding | upstream | 103882 | 58141889 ~ 58142108 (+) |
| G419975 | NA | non-coding | upstream | 121251 | 58124669 ~ 58124739 (+) |
| G419989 | NA | non-coding | upstream | 134464 | 58109666 ~ 58111526 (+) |
| G420062 | NA | non-coding | downstream | 22581 | 58269119 ~ 58269426 (+) |
| G420025 | NA | non-coding | downstream | 126582 | 58373120 ~ 58373991 (+) |
| G420093 | NA | non-coding | downstream | 133378 | 58379916 ~ 58380305 (+) |
| G420101 | LOC106613635 | non-coding | downstream | 142947 | 58389485 ~ 58389869 (+) |
| G420117 | LOC100846954 | non-coding | downstream | 164702 | 58411240 ~ 58418268 (+) |
| G419452 | NA | other | upstream | 346342 | 57884380 ~ 57899648 (+) |
| LOC110524119 | LOC106613607 | other | upstream | 878653 | 57352343 ~ 57367627 (+) |
| LOC100135807 | LOC106613594 | other | upstream | 1287825 | 56943838 ~ 56958165 (+) |
| G418251 | rtca | other | upstream | 1320814 | 56923924 ~ 56925176 (+) |
| G418119 | LOC106613588 | other | upstream | 1516169 | 56726185 ~ 56729821 (+) |
| G420634 | NA | other | downstream | 696190 | 58942728 ~ 58944217 (+) |
| LOC110524226 | LOC106573564 | other | downstream | 2447719 | 60694220 ~ 60695905 (+) |
| G423922 | NA | other | downstream | 3474999 | 61721537 ~ 61722024 (+) |
| G424079 | NA | other | downstream | 3858985 | 62105523 ~ 62105872 (+) |
