Gene
RNA
| Item | Value |
|---|---|
| gene id | G420327 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 58270747 ~ 58271025 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU476342 | True | 279 | lncRNA | 0.34 | 1 | 58270747 | 58271025 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524141 | LOC106613631 | coding | downstream | 83698 | 58163918 ~ 58187049 (-) |
| pgpi | pgpi | coding | downstream | 150708 | 58115798 ~ 58120039 (-) |
| LOC110524138 | LOC106613627 | coding | downstream | 161302 | 58090616 ~ 58109445 (-) |
| homer3b | LOC106613626 | coding | downstream | 188872 | 58033672 ~ 58081875 (-) |
| LOC110522874 | NA | coding | downstream | 256087 | 58002584 ~ 58014660 (-) |
| LOC118964716 | LOC106613467 | coding | upstream | 106533 | 58377558 ~ 58380045 (-) |
| LOC110524144 | LOC106613635 | coding | upstream | 108755 | 58379780 ~ 58409320 (-) |
| mast3b | LOC106613636 | coding | upstream | 145847 | 58416872 ~ 58475233 (-) |
| LOC110524151 | LOC106573894 | coding | upstream | 275359 | 58546384 ~ 58567683 (-) |
| LOC110524152 | LOC100194657 | coding | upstream | 302233 | 58573258 ~ 58578611 (-) |
| G420320 | NA | non-coding | downstream | 10870 | 58259621 ~ 58259877 (-) |
| G420316 | NA | non-coding | downstream | 16191 | 58254331 ~ 58254556 (-) |
| G420315 | NA | non-coding | downstream | 16983 | 58253550 ~ 58253764 (-) |
| G420314 | NA | non-coding | downstream | 17318 | 58253202 ~ 58253429 (-) |
| G420313 | NA | non-coding | downstream | 18832 | 58251638 ~ 58251915 (-) |
| G420336 | NA | non-coding | upstream | 11703 | 58282728 ~ 58282929 (-) |
| G420338 | NA | non-coding | upstream | 13893 | 58284918 ~ 58285153 (-) |
| G420339 | NA | non-coding | upstream | 15468 | 58286493 ~ 58286817 (-) |
| G420341 | NA | non-coding | upstream | 17045 | 58288070 ~ 58288306 (-) |
| G420370 | NA | non-coding | upstream | 96251 | 58367276 ~ 58368693 (-) |
| G420193 | NA | other | downstream | 156687 | 58112387 ~ 58114060 (-) |
| G419714 | NA | other | downstream | 564811 | 57699745 ~ 57705936 (-) |
| LOC110524128 | LOC107602773 | other | downstream | 644573 | 57612040 ~ 57627128 (-) |
| G419603 | NA | other | downstream | 659180 | 57611059 ~ 57611567 (-) |
| G418830 | NA | other | downstream | 1436152 | 56834026 ~ 56834595 (-) |
| G420421 | NA | other | upstream | 142103 | 58413128 ~ 58414143 (-) |
| G420982 | LOC106613655 | other | upstream | 755078 | 59026103 ~ 59036299 (-) |
| lsg1 | lsg1 | other | upstream | 861845 | 59131152 ~ 59138429 (-) |
| G422347 | NA | other | upstream | 1829740 | 60100765 ~ 60101056 (-) |
| LOC110524239 | LOC106573579 | other | upstream | 2787969 | 61058949 ~ 61081864 (-) |
