Gene
RNA
| Item | Value |
|---|---|
| gene id | G420336 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 58282728 ~ 58282929 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU476351 | True | 202 | lncRNA | 0.36 | 1 | 58282728 | 58282929 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524141 | LOC106613631 | coding | downstream | 95679 | 58163918 ~ 58187049 (-) |
| pgpi | pgpi | coding | downstream | 162689 | 58115798 ~ 58120039 (-) |
| LOC110524138 | LOC106613627 | coding | downstream | 173283 | 58090616 ~ 58109445 (-) |
| homer3b | LOC106613626 | coding | downstream | 200853 | 58033672 ~ 58081875 (-) |
| LOC110522874 | NA | coding | downstream | 268068 | 58002584 ~ 58014660 (-) |
| LOC118964716 | LOC106613467 | coding | upstream | 94629 | 58377558 ~ 58380045 (-) |
| LOC110524144 | LOC106613635 | coding | upstream | 96851 | 58379780 ~ 58409320 (-) |
| mast3b | LOC106613636 | coding | upstream | 133943 | 58416872 ~ 58475233 (-) |
| LOC110524151 | LOC106573894 | coding | upstream | 263455 | 58546384 ~ 58567683 (-) |
| LOC110524152 | LOC100194657 | coding | upstream | 290329 | 58573258 ~ 58578611 (-) |
| G420327 | NA | non-coding | downstream | 11703 | 58270747 ~ 58271025 (-) |
| G420320 | NA | non-coding | downstream | 22851 | 58259621 ~ 58259877 (-) |
| G420316 | NA | non-coding | downstream | 28172 | 58254331 ~ 58254556 (-) |
| G420315 | NA | non-coding | downstream | 28964 | 58253550 ~ 58253764 (-) |
| G420314 | NA | non-coding | downstream | 29299 | 58253202 ~ 58253429 (-) |
| G420338 | NA | non-coding | upstream | 1989 | 58284918 ~ 58285153 (-) |
| G420339 | NA | non-coding | upstream | 3564 | 58286493 ~ 58286817 (-) |
| G420341 | NA | non-coding | upstream | 5141 | 58288070 ~ 58288306 (-) |
| G420370 | NA | non-coding | upstream | 84347 | 58367276 ~ 58368693 (-) |
| G420368 | NA | non-coding | upstream | 85978 | 58368907 ~ 58370010 (-) |
| G420193 | NA | other | downstream | 168668 | 58112387 ~ 58114060 (-) |
| G419714 | NA | other | downstream | 576792 | 57699745 ~ 57705936 (-) |
| LOC110524128 | LOC107602773 | other | downstream | 656554 | 57612040 ~ 57627128 (-) |
| G419603 | NA | other | downstream | 671161 | 57611059 ~ 57611567 (-) |
| G418830 | NA | other | downstream | 1448133 | 56834026 ~ 56834595 (-) |
| G420421 | NA | other | upstream | 130199 | 58413128 ~ 58414143 (-) |
| G420982 | LOC106613655 | other | upstream | 743174 | 59026103 ~ 59036299 (-) |
| lsg1 | lsg1 | other | upstream | 849941 | 59131152 ~ 59138429 (-) |
| G422347 | NA | other | upstream | 1817836 | 60100765 ~ 60101056 (-) |
| LOC110524239 | LOC106573579 | other | upstream | 2776065 | 61058949 ~ 61081864 (-) |
