G420421


Basic Information

Item Value
gene id G420421
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 58413128 ~ 58414143 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU476443
cagattccaaactctccaccatggccaagaccaaagagctctccaaggatgtcagggacaagattgtagacaaggctggaatgggctacaaaaccattgccaagcagcttggtgagaaggtgacaacagttggtgcgataattcgcaaatggaagaaacacaaaagaactgtcaatttccctcggcctggggctctatgcaagatctcacctcgtggagttacAATGATTATGAGaatggtgaggaatcagcccagaactacacgggaggatcttgtcaatgatctcaaggcagctgggaccatagtcaccaagaaaacaattggtaacacactacgccgtgaatgctgaaatcctgcagcacccgcaaggtccccctgctcaagaaagcacatatacatgcccatctgaagtttgccaatgaacatctgaatgattcagaggacaactgattgaaagtgttgtggtcagatgagaccaaaatggagctctttggcatcaactcaactcgccgtgtttggaggaggaggaatgctgcctatgaccccaagaacaccatcctcaccgtcaaacatggaggtggatacattatgctttgggggtgttttttctgctaaggggacaggacaacttcaccgcatcaaagggacggtggacggggccatgtaccgtcaaatcttgggtgagaacctccttccctctgccagggcattgaaaatgggtcgtggataggtattccagcatgacaatgacccaaaacacatggccaaggcaacaaaggagtgactcaagaagaagcacattaaggtcctggagtggcctagccagtctccagaccttaatcccatagacaatctgtggagggagctgaaggttcgagttgccaaacgtcagcctcgaaaccttaatgacttggagaagatctgcaaacctggtggccaactacgagaaacgtctgacctctgtgattgccaacaagggttttgccaccaagtactaagtcatgttttgcagagg

Function

NR:

description
transposase

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU476443 True 1016 TUCP 0.49 1 58413128 58414143

Neighbor

gene id symbol gene type direction distance location
LOC110524144 LOC106613635 coding downstream 3808 58379780 ~ 58409320 (-)
LOC118964716 LOC106613467 coding downstream 33083 58377558 ~ 58380045 (-)
LOC110524141 LOC106613631 coding downstream 226079 58163918 ~ 58187049 (-)
pgpi pgpi coding downstream 293089 58115798 ~ 58120039 (-)
LOC110524138 LOC106613627 coding downstream 303683 58090616 ~ 58109445 (-)
mast3b LOC106613636 coding upstream 2729 58416872 ~ 58475233 (-)
LOC110524151 LOC106573894 coding upstream 132241 58546384 ~ 58567683 (-)
LOC110524152 LOC100194657 coding upstream 159115 58573258 ~ 58578611 (-)
LOC110524158 LOC106613645 coding upstream 257328 58671471 ~ 58675928 (-)
LOC110524167 LOC106613995 coding upstream 420119 58834262 ~ 58836111 (-)
G420420 NA non-coding downstream 119 58411333 ~ 58413009 (-)
G420429 NA non-coding downstream 12361 58400559 ~ 58400767 (-)
G420369 NA non-coding downstream 39094 58373159 ~ 58374034 (-)
G420368 NA non-coding downstream 43118 58368907 ~ 58370010 (-)
G420422 NA non-coding upstream 338 58414481 ~ 58415479 (-)
G420437 NA non-coding upstream 5943 58420086 ~ 58420474 (-)
G420442 NA non-coding upstream 42222 58456365 ~ 58456602 (-)
G420466 NA non-coding upstream 63644 58477787 ~ 58477998 (-)
G420468 NA non-coding upstream 64223 58478366 ~ 58478835 (-)
G420193 NA other downstream 299068 58112387 ~ 58114060 (-)
G419714 NA other downstream 707192 57699745 ~ 57705936 (-)
LOC110524128 LOC107602773 other downstream 786954 57612040 ~ 57627128 (-)
G419603 NA other downstream 801561 57611059 ~ 57611567 (-)
G418830 NA other downstream 1578533 56834026 ~ 56834595 (-)
G420982 LOC106613655 other upstream 611960 59026103 ~ 59036299 (-)
lsg1 lsg1 other upstream 718727 59131152 ~ 59138429 (-)
G422347 NA other upstream 1686622 60100765 ~ 60101056 (-)
LOC110524239 LOC106573579 other upstream 2644851 61058949 ~ 61081864 (-)
G424474 NA other upstream 3202727 61616870 ~ 61617244 (-)

Expression


Co-expression Network