Gene
RNA
| Item | Value |
|---|---|
| gene id | G420422 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 58414481 ~ 58415479 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU476444 | True | 999 | lncRNA | 0.38 | 1 | 58414481 | 58415479 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524144 | LOC106613635 | coding | downstream | 5161 | 58379780 ~ 58409320 (-) |
| LOC118964716 | LOC106613467 | coding | downstream | 34436 | 58377558 ~ 58380045 (-) |
| LOC110524141 | LOC106613631 | coding | downstream | 227432 | 58163918 ~ 58187049 (-) |
| pgpi | pgpi | coding | downstream | 294442 | 58115798 ~ 58120039 (-) |
| LOC110524138 | LOC106613627 | coding | downstream | 305036 | 58090616 ~ 58109445 (-) |
| mast3b | LOC106613636 | coding | upstream | 1393 | 58416872 ~ 58475233 (-) |
| LOC110524151 | LOC106573894 | coding | upstream | 130905 | 58546384 ~ 58567683 (-) |
| LOC110524152 | LOC100194657 | coding | upstream | 157779 | 58573258 ~ 58578611 (-) |
| LOC110524158 | LOC106613645 | coding | upstream | 255992 | 58671471 ~ 58675928 (-) |
| LOC110524167 | LOC106613995 | coding | upstream | 418783 | 58834262 ~ 58836111 (-) |
| G420420 | NA | non-coding | downstream | 1472 | 58411333 ~ 58413009 (-) |
| G420429 | NA | non-coding | downstream | 13714 | 58400559 ~ 58400767 (-) |
| G420369 | NA | non-coding | downstream | 40447 | 58373159 ~ 58374034 (-) |
| G420368 | NA | non-coding | downstream | 44471 | 58368907 ~ 58370010 (-) |
| G420437 | NA | non-coding | upstream | 4607 | 58420086 ~ 58420474 (-) |
| G420442 | NA | non-coding | upstream | 40886 | 58456365 ~ 58456602 (-) |
| G420466 | NA | non-coding | upstream | 62308 | 58477787 ~ 58477998 (-) |
| G420468 | NA | non-coding | upstream | 62887 | 58478366 ~ 58478835 (-) |
| G420763 | LOC106613638 | non-coding | upstream | 89596 | 58505075 ~ 58507002 (-) |
| G420421 | NA | other | downstream | 338 | 58413128 ~ 58414143 (-) |
| G420193 | NA | other | downstream | 300421 | 58112387 ~ 58114060 (-) |
| G419714 | NA | other | downstream | 708545 | 57699745 ~ 57705936 (-) |
| LOC110524128 | LOC107602773 | other | downstream | 788307 | 57612040 ~ 57627128 (-) |
| G419603 | NA | other | downstream | 802914 | 57611059 ~ 57611567 (-) |
| G420982 | LOC106613655 | other | upstream | 610624 | 59026103 ~ 59036299 (-) |
| lsg1 | lsg1 | other | upstream | 717391 | 59131152 ~ 59138429 (-) |
| G422347 | NA | other | upstream | 1685286 | 60100765 ~ 60101056 (-) |
| LOC110524239 | LOC106573579 | other | upstream | 2643515 | 61058949 ~ 61081864 (-) |
| G424474 | NA | other | upstream | 3201391 | 61616870 ~ 61617244 (-) |
