Gene
RNA
| Item | Value |
|---|---|
| gene id | G420145 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 58456356 ~ 58456604 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU476132 | True | 249 | lncRNA | 0.41 | 1 | 58456356 | 58456604 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118964627 | NA | coding | upstream | 51467 | 58401429 ~ 58404889 (+) |
| LOC110524143 | LOC106573897 | coding | upstream | 86266 | 58312332 ~ 58370090 (+) |
| LOC110524142 | NA | coding | upstream | 250986 | 58199387 ~ 58205370 (+) |
| LOC110524140 | LOC106613630 | coding | upstream | 296222 | 58158521 ~ 58160134 (+) |
| LOC110524139 | lsm4 | coding | upstream | 331958 | 58120065 ~ 58124398 (+) |
| LOC118964530 | NA | coding | downstream | 24333 | 58480937 ~ 58482309 (+) |
| LOC110524147 | LOC106613637 | coding | downstream | 27439 | 58484043 ~ 58493673 (+) |
| LOC110524149 | LOC106613638 | coding | downstream | 43501 | 58500105 ~ 58505933 (+) |
| LOC110524150 | LOC106613639 | coding | downstream | 56325 | 58512929 ~ 58539436 (+) |
| LOC110524154 | NA | coding | downstream | 122938 | 58579542 ~ 58620188 (+) |
| G420144 | NA | non-coding | upstream | 986 | 58455155 ~ 58455370 (+) |
| G420139 | NA | non-coding | upstream | 11106 | 58444947 ~ 58445250 (+) |
| G420138 | NA | non-coding | upstream | 11626 | 58444502 ~ 58444730 (+) |
| G420136 | NA | non-coding | upstream | 16115 | 58440010 ~ 58440241 (+) |
| G420134 | NA | non-coding | upstream | 20171 | 58435963 ~ 58436185 (+) |
| G420153 | NA | non-coding | downstream | 9836 | 58466440 ~ 58466714 (+) |
| G420155 | NA | non-coding | downstream | 11388 | 58467992 ~ 58468196 (+) |
| G420159 | NA | non-coding | downstream | 18242 | 58474846 ~ 58475252 (+) |
| G420465 | NA | non-coding | downstream | 20578 | 58477182 ~ 58477405 (+) |
| G420117 | LOC100846954 | other | upstream | 39580 | 58411240 ~ 58418268 (+) |
| G419452 | NA | other | upstream | 556708 | 57884380 ~ 57899648 (+) |
| LOC110524119 | LOC106613607 | other | upstream | 1089019 | 57352343 ~ 57367627 (+) |
| LOC100135807 | LOC106613594 | other | upstream | 1498191 | 56943838 ~ 56958165 (+) |
| G418251 | rtca | other | upstream | 1531180 | 56923924 ~ 56925176 (+) |
| G420634 | NA | other | downstream | 486124 | 58942728 ~ 58944217 (+) |
| LOC110524226 | LOC106573564 | other | downstream | 2237653 | 60694220 ~ 60695905 (+) |
| G423922 | NA | other | downstream | 3264933 | 61721537 ~ 61722024 (+) |
| G424079 | NA | other | downstream | 3648919 | 62105523 ~ 62105872 (+) |
| LOC110524265 | LOC106613745 | other | downstream | 3826548 | 62283054 ~ 62327772 (+) |
