Gene
RNA
| Item | Value |
|---|---|
| gene id | G420466 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 58477787 ~ 58477998 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| guanine nucleotide exchange factor VAV3-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU476489 | True | 212 | lncRNA | 0.43 | 1 | 58477787 | 58477998 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| mast3b | LOC106613636 | coding | downstream | 2554 | 58416872 ~ 58475233 (-) |
| LOC110524144 | LOC106613635 | coding | downstream | 68467 | 58379780 ~ 58409320 (-) |
| LOC118964716 | LOC106613467 | coding | downstream | 97742 | 58377558 ~ 58380045 (-) |
| LOC110524141 | LOC106613631 | coding | downstream | 290738 | 58163918 ~ 58187049 (-) |
| pgpi | pgpi | coding | downstream | 357748 | 58115798 ~ 58120039 (-) |
| LOC110524151 | LOC106573894 | coding | upstream | 68386 | 58546384 ~ 58567683 (-) |
| LOC110524152 | LOC100194657 | coding | upstream | 95260 | 58573258 ~ 58578611 (-) |
| LOC110524158 | LOC106613645 | coding | upstream | 193473 | 58671471 ~ 58675928 (-) |
| LOC110524167 | LOC106613995 | coding | upstream | 356264 | 58834262 ~ 58836111 (-) |
| gamt | gamt | coding | upstream | 374021 | 58852019 ~ 58856447 (-) |
| G420442 | NA | non-coding | downstream | 21185 | 58456365 ~ 58456602 (-) |
| G420437 | NA | non-coding | downstream | 57313 | 58420086 ~ 58420474 (-) |
| G420422 | NA | non-coding | downstream | 62308 | 58414481 ~ 58415479 (-) |
| G420420 | NA | non-coding | downstream | 64778 | 58411333 ~ 58413009 (-) |
| G420429 | NA | non-coding | downstream | 77020 | 58400559 ~ 58400767 (-) |
| G420468 | NA | non-coding | upstream | 368 | 58478366 ~ 58478835 (-) |
| G420763 | LOC106613638 | non-coding | upstream | 27077 | 58505075 ~ 58507002 (-) |
| G420773 | NA | non-coding | upstream | 43880 | 58521878 ~ 58522736 (-) |
| G420808 | NA | non-coding | upstream | 124400 | 58602398 ~ 58602750 (-) |
| G420809 | NA | non-coding | upstream | 141455 | 58619453 ~ 58620031 (-) |
| G420421 | NA | other | downstream | 63644 | 58413128 ~ 58414143 (-) |
| G420193 | NA | other | downstream | 363727 | 58112387 ~ 58114060 (-) |
| G419714 | NA | other | downstream | 771851 | 57699745 ~ 57705936 (-) |
| LOC110524128 | LOC107602773 | other | downstream | 851613 | 57612040 ~ 57627128 (-) |
| G419603 | NA | other | downstream | 866220 | 57611059 ~ 57611567 (-) |
| G420982 | LOC106613655 | other | upstream | 548105 | 59026103 ~ 59036299 (-) |
| lsg1 | lsg1 | other | upstream | 654872 | 59131152 ~ 59138429 (-) |
| G422347 | NA | other | upstream | 1622767 | 60100765 ~ 60101056 (-) |
| LOC110524239 | LOC106573579 | other | upstream | 2580996 | 61058949 ~ 61081864 (-) |
| G424474 | NA | other | upstream | 3138872 | 61616870 ~ 61617244 (-) |
