G420763 (LOC106613638)


Basic Information

Item Value
gene id G420763
gene name LOC106613638
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 58505075 ~ 58507002 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU476832
acccatctacacacaataacccataatgacaaattgaaaacatatTTTGGGATTttctttgcacatttattgaaaatgaaatatcaaatatacttaagtattcacacccctgagtcaatacatgttagaatcacctttggtagtgattacagctgttagtctttctgggtaagtctctaagagctttgcacacctggattgtaaaacatttgaacattattatttttcttcttctagctgtcaagttggttgttgaccattgttagacagctattttcaagtcttgccatatattttcaactcaatttaagtcaaaactgtgactaggccactcaggaacattcaatattGTCTTGTATTgaaGTAGTCATTCGAAAATCATGATAAACACTGTTATCGCACACATAAgtacatgcaacttattatgtgacttgttaagcaaatttactactgaaattatttaggcttgtcatagcaaaggggttgaatacttattgactcaagacatttcaggtttttgttcatttgtaaaaattccactttaacattatagggtattgtgtgtaggccagtgacacacaatccaaatttaatcaattttaaattcaggctgtaacacaacaagttgtggaaaaagtcaaggggtgtgaatactttctgaaggcactgtatgtgtcatCCATCCTTCTTCCAAAGGACCCTTCTGTGGATTAAATTGACTGAAAATCTCCCAAATCATggtattgtttttgttttcagTTTTGTGAGGAATCACCCATGAATCAAATTGTCACAGTCACTTTGGGCAGAGGGATTACCGTTGCGTGGTGGTTTGTGGAAGTATGATCGGCGTACACGCAATTCCTGCAAAAGACTCAGGGAAGTGCAAGTCCCTCTCCCACTCATCAGTCTCTGTGTTGTACACTTGCACGATGCTTGTGACATTGTTTAGATGCCAATTGTACCCTCCAACAATATAGATCTTTTTGTCCAACAAGCAGCAGCCTGCCTCAGATTGCCCTGCTCGCATGGGGCTAACAGTGGTCCACTGGTCATTCTCTGGAATATAATACTCAACCACCAGGACGTCAAAGCAGCGGTCCACGTGGTCCATGCGACCGCCCAGGCAGTAAACACGGTCTTTGGCGCTGATCATAGCATGAAGCACTCTGGGCTCGTTCATGGGCGATTTGAAGTCCCATTGGTCAGATGTGGGATCATAACAGTGCAGGGCTTTCTTATCGTCCACCGAAACACCGTAACCCCCTGAGATGTAGAGCTTGTCACCACAGGGAGTTCCTGCATGGCCCCAGATTCTGCGTTTCAGTGGTTCCACGTAGGTCCACTCATTTTTCTTGGGACAGTAGCACTCTACGGACGACAGACTTCCAGATCGGTTGCGCCCCCCAGTGGCGT

Function

NR:

description
PREDICTED: kelch-like protein 26 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU476832 True 1416 lncRNA 0.42 2 58505075 58507002

Neighbor

gene id symbol gene type direction distance location
mast3b LOC106613636 coding downstream 29842 58416872 ~ 58475233 (-)
LOC110524144 LOC106613635 coding downstream 95755 58379780 ~ 58409320 (-)
LOC118964716 LOC106613467 coding downstream 125030 58377558 ~ 58380045 (-)
LOC110524141 LOC106613631 coding downstream 318026 58163918 ~ 58187049 (-)
pgpi pgpi coding downstream 385036 58115798 ~ 58120039 (-)
LOC110524151 LOC106573894 coding upstream 39382 58546384 ~ 58567683 (-)
LOC110524152 LOC100194657 coding upstream 66256 58573258 ~ 58578611 (-)
LOC110524158 LOC106613645 coding upstream 164469 58671471 ~ 58675928 (-)
LOC110524167 LOC106613995 coding upstream 327260 58834262 ~ 58836111 (-)
gamt gamt coding upstream 345017 58852019 ~ 58856447 (-)
G420468 NA non-coding downstream 26240 58478366 ~ 58478835 (-)
G420466 NA non-coding downstream 27077 58477787 ~ 58477998 (-)
G420442 NA non-coding downstream 48473 58456365 ~ 58456602 (-)
G420437 NA non-coding downstream 84601 58420086 ~ 58420474 (-)
G420422 NA non-coding downstream 89596 58414481 ~ 58415479 (-)
G420773 NA non-coding upstream 14876 58521878 ~ 58522736 (-)
G420808 NA non-coding upstream 95396 58602398 ~ 58602750 (-)
G420809 NA non-coding upstream 112451 58619453 ~ 58620031 (-)
G420825 NA non-coding upstream 150112 58657114 ~ 58657407 (-)
G420828 NA non-coding upstream 152276 58659278 ~ 58659542 (-)
G420421 NA other downstream 90932 58413128 ~ 58414143 (-)
G420193 NA other downstream 391015 58112387 ~ 58114060 (-)
G419714 NA other downstream 799139 57699745 ~ 57705936 (-)
LOC110524128 LOC107602773 other downstream 878901 57612040 ~ 57627128 (-)
G419603 NA other downstream 893508 57611059 ~ 57611567 (-)
G420982 LOC106613655 other upstream 519101 59026103 ~ 59036299 (-)
lsg1 lsg1 other upstream 625868 59131152 ~ 59138429 (-)
G422347 NA other upstream 1593763 60100765 ~ 60101056 (-)
LOC110524239 LOC106573579 other upstream 2551992 61058949 ~ 61081864 (-)
G424474 NA other upstream 3109868 61616870 ~ 61617244 (-)

Expression


Co-expression Network