Gene
RNA
| Item | Value |
|---|---|
| gene id | G420809 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 58619453 ~ 58620031 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU476885 | False | 579 | lncRNA | 0.37 | 1 | 58619453 | 58620031 |
| TU476884 | True | 448 | lncRNA | 0.36 | 1 | 58619584 | 58620031 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524152 | LOC100194657 | coding | downstream | 40842 | 58573258 ~ 58578611 (-) |
| LOC110524151 | LOC106573894 | coding | downstream | 51770 | 58546384 ~ 58567683 (-) |
| mast3b | LOC106613636 | coding | downstream | 144220 | 58416872 ~ 58475233 (-) |
| LOC110524144 | LOC106613635 | coding | downstream | 210133 | 58379780 ~ 58409320 (-) |
| LOC118964716 | LOC106613467 | coding | downstream | 239408 | 58377558 ~ 58380045 (-) |
| LOC110524158 | LOC106613645 | coding | upstream | 51440 | 58671471 ~ 58675928 (-) |
| LOC110524167 | LOC106613995 | coding | upstream | 214231 | 58834262 ~ 58836111 (-) |
| gamt | gamt | coding | upstream | 231988 | 58852019 ~ 58856447 (-) |
| LOC118964628 | NA | coding | upstream | 362657 | 58982688 ~ 59001580 (-) |
| trnaa-ugc-13 | NA | coding | upstream | 406495 | 59026526 ~ 59026598 (-) |
| G420808 | NA | non-coding | downstream | 16703 | 58602398 ~ 58602750 (-) |
| G420773 | NA | non-coding | downstream | 96717 | 58521878 ~ 58522736 (-) |
| G420763 | LOC106613638 | non-coding | downstream | 112451 | 58505075 ~ 58507002 (-) |
| G420468 | NA | non-coding | downstream | 140618 | 58478366 ~ 58478835 (-) |
| G420466 | NA | non-coding | downstream | 141455 | 58477787 ~ 58477998 (-) |
| G420825 | NA | non-coding | upstream | 37083 | 58657114 ~ 58657407 (-) |
| G420828 | NA | non-coding | upstream | 39247 | 58659278 ~ 58659542 (-) |
| G420832 | NA | non-coding | upstream | 44407 | 58664438 ~ 58664657 (-) |
| G420833 | NA | non-coding | upstream | 44661 | 58664692 ~ 58664959 (-) |
| G420837 | NA | non-coding | upstream | 50019 | 58670050 ~ 58670597 (-) |
| G420421 | NA | other | downstream | 205310 | 58413128 ~ 58414143 (-) |
| G420193 | NA | other | downstream | 505393 | 58112387 ~ 58114060 (-) |
| G419714 | NA | other | downstream | 913517 | 57699745 ~ 57705936 (-) |
| LOC110524128 | LOC107602773 | other | downstream | 993279 | 57612040 ~ 57627128 (-) |
| G419603 | NA | other | downstream | 1007886 | 57611059 ~ 57611567 (-) |
| G420982 | LOC106613655 | other | upstream | 406072 | 59026103 ~ 59036299 (-) |
| lsg1 | lsg1 | other | upstream | 512839 | 59131152 ~ 59138429 (-) |
| G422347 | NA | other | upstream | 1480734 | 60100765 ~ 60101056 (-) |
| LOC110524239 | LOC106573579 | other | upstream | 2438963 | 61058949 ~ 61081864 (-) |
| G424474 | NA | other | upstream | 2996839 | 61616870 ~ 61617244 (-) |
