G420825



Basic Information


Item Value
gene id G420825
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 58657114 ~ 58657407 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU476909
CAttagcattttttgggggggtaaatacaggtgaaTATGTTGAGAAAAAAATCATGTTGTcttagagagatttacacagttatcaaaacgtcacaccaGGATATGCCTATATCCTgcttctaaaatcccctatgggaaaataaatggtggaaaaacaacTGGAACCATTTCCTTATTTGACCACTATGTTTTATGGATATTATGACTCATATGGTGGTACTCCATTGACCTCATCCAAGCAATCTTCAAATACCCATGACGTGCCTGAAAGTAAGAAATGGAAGGGGAATATTG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU476909 True 294 lncRNA 0.37 1 58657114 58657407

Neighbor


gene id symbol gene type direction distance location
LOC110524152 LOC100194657 coding downstream 78503 58573258 ~ 58578611 (-)
LOC110524151 LOC106573894 coding downstream 89431 58546384 ~ 58567683 (-)
mast3b LOC106613636 coding downstream 181881 58416872 ~ 58475233 (-)
LOC110524144 LOC106613635 coding downstream 247794 58379780 ~ 58409320 (-)
LOC118964716 LOC106613467 coding downstream 277069 58377558 ~ 58380045 (-)
LOC110524158 LOC106613645 coding upstream 14064 58671471 ~ 58675928 (-)
LOC110524167 LOC106613995 coding upstream 176855 58834262 ~ 58836111 (-)
gamt gamt coding upstream 194612 58852019 ~ 58856447 (-)
LOC118964628 NA coding upstream 325281 58982688 ~ 59001580 (-)
trnaa-ugc-13 NA coding upstream 369119 59026526 ~ 59026598 (-)
G420809 NA non-coding downstream 37083 58619453 ~ 58620031 (-)
G420808 NA non-coding downstream 54364 58602398 ~ 58602750 (-)
G420773 NA non-coding downstream 134378 58521878 ~ 58522736 (-)
G420763 LOC106613638 non-coding downstream 150112 58505075 ~ 58507002 (-)
G420468 NA non-coding downstream 178279 58478366 ~ 58478835 (-)
G420828 NA non-coding upstream 1871 58659278 ~ 58659542 (-)
G420832 NA non-coding upstream 7031 58664438 ~ 58664657 (-)
G420833 NA non-coding upstream 7285 58664692 ~ 58664959 (-)
G420837 NA non-coding upstream 12643 58670050 ~ 58670597 (-)
G420843 NA non-coding upstream 26499 58683906 ~ 58684177 (-)
G420421 NA other downstream 242971 58413128 ~ 58414143 (-)
G420193 NA other downstream 543054 58112387 ~ 58114060 (-)
G419714 NA other downstream 951178 57699745 ~ 57705936 (-)
LOC110524128 LOC107602773 other downstream 1030940 57612040 ~ 57627128 (-)
G419603 NA other downstream 1045547 57611059 ~ 57611567 (-)
G420982 LOC106613655 other upstream 368696 59026103 ~ 59036299 (-)
lsg1 lsg1 other upstream 475463 59131152 ~ 59138429 (-)
G422347 NA other upstream 1443358 60100765 ~ 60101056 (-)
LOC110524239 LOC106573579 other upstream 2401587 61058949 ~ 61081864 (-)
G424474 NA other upstream 2959463 61616870 ~ 61617244 (-)

Expression



Co-expression Network