XLOC_023443 (dap)


Basic Information

Item Value
gene id XLOC_023443
gene name dap
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 22070290 ~ 22103585 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00046364
ATCACGCACCGTTGCCAAACAATGGGCAGGAAAAAGCCACGTTGACGAAGTCGACGGTAGTCTGCGTTATTTTTCTGCCAGGAAACTGAaggattgtttttttatttagaagaCAACGACGCGACTCTTTGGAAGAAGCGCTTGACAGCAGCCATGTCATCGCCGCCCAAAGAGAAAACCGAGACCAGAGCTGGTCACCTTCCTGCTGTGAAAGCAGGAGGCATGAGGATAGTTCAGAAGCACCAGTCTCCAATTGAGGTGCCAGACAAGAAGGATGACAAAGACAGTACAGAATATGAGACTGTGATACCACCAAAGCTGCCTGTTGTGGTCTCTGGAGTTGTCACTAAGGGAGATAAAGACTTCACCCCTGCTGCTGCCCAGGTGGCCCATCAGAAACCTGTGCCTTCAGCACAGAAGCTGCCTGCTGGCCAGCACCTTAACCAGCACATCCACCAGCCCAGGAAATGAGCCTTCAGCCGCTCCAGAACATCACGGGCCCCCCCACATGGGGCCAGGACCACACCACCCCAAACACCTGCTCAGGTTGCCAGGGTTCTCTTGCCGTCAAACATTCCTTACGCCCCCTCCCCCTCCCTCCGTCTGTGCCTGCAAGTGTCCATTTTCGACCAGTATCATgacaaacattcattttcttgtttcgTATCTGTAAATCATCGCAACACTAAAAATCGAAGGCTTCATTGCAGATCGCCAATCAGAAACATTCTAATTCCATGGGTTCATTTCATGAGGGATTTGtggatgttttattttcttttttaattttacatgaaTCGTTCCAGAGAGATGTAAATTgtataaatcagttttgttttgtttttttgaagttGGTGAATGTTGTATATTAGGCATTAGGTACTAGGTGTGGCTATCTGATATCTGAATAAAGAGTTAATATAAAACCACGCACGCCTTTGCTCttaaagacactttttttttgagCCAGAATTGCATTACATGAAAATATCGGTGCTTTGGCAGATTAGTGTTAAAATGCTGAGCTGAAATGCGGTCTGTGTTTAGTGGTCCAGGTTGAATTTATTTCAGAAATTTGCCTATAGACTGAATAAAACAATTTCAATAGTTTTCTTCAAAGCATTCATATTATTGAATTGCACTTCACAAAGAAAATAAGTGCTAAAAATAAAGCACATACAATGCATAATTGATcttaatatacatttaaagtcagaattattagtaattattatcagaattattagtaaataatatttgattttttttttcttttttttgaatagatatttttcaagacacttctatacagcttaaagtgacatttaaaggcttatctaggttaatacGGTTatctgggcaggttagggtaattacgaaggttattgtataacaatgatttgttctgtagactattgaaaaaatatagcttaaaggagctaataattttgaccttaaaatgggatttaaaaaattaaaaactgcttttattctagccgaaataaaacgaataagactttctccagaaaaatatatatgcatattatcagacatactgtgaaaatgtccttactctgttaaacattatttggcaaatatttaaaaaaagaaaaaaatccgaaggggggctaataattctgacttcaactgtatgtgtaaagTATCCctctttattaaatatacataaagtacactgaaacaaaatgaaaattaactTAAAAGGTAGTTTGTTTTCATGCTGTTTTGAGCTGTTCATGACAGCCATTCAACCAGGAATAATTGTAGAAATTTGTGGCGAATAAAAAGCAGGGGACTTTAAATACTCTCATTGCGAGCACtgtaataaaaagttaaaacaa
>TCONS_00046366
AGTCACATCTGAGGCTCTTTTTGTCCTCCGGCGAGCTGGGAGATAAAGACTTCACCCCTGCTGCTGCCCAGGTGGCCCATCAGAAACCTGTGCCTTCAGCACAGAAGCTGCCTGCTGGCCAGCACCTTAACCAGCACATCCACCAGCCCAGGAAATGAGCCTTCAGCCGCTCCAGAACATCACGGGCCCCCCCACATGGGGCCAGGACCACACCACCCCAAACACCTGCTCAGGTTGCCAGGGTTCTCTTGCCGTCAAACATTCCTTACGCCCCCTCCCCCTCCCTCCGTCTGTGCCTGCAAGTGTCCATTTTCGACCAGTATCATgacaaacattcattttcttgtttcgTATCTGTAAATCATCGCAACACTAAAAATCGAAGGCTTCATTGCAGATCGCCAATCAGAAACATTCTAATTCCATGGGTTCATTTCATGAGGGATTTGtggatgttttattttcttttttaattttacatgaaTCGTTCCAGAGAGATGTAAATTgtataaatcagttttgttttgtttttttgaagttGGTGAATGTTGTATATTAGGCATTAGGTACTAGGTGTGGCTATCTGATATCTGAATAAAGAGTTAATATAAAACC
>TCONS_00046367
GTTATTCATTACCACACTACGCAGCTGTTTATGTTCCTTTCCACATATTCCCTATGGAAGAATTAATGATCCTCAAAATGCGGAGACTGATTAATATACAAGCTTATTTACACTCTGTTGCTGCCATGAAATGAGAGTGCTTTCGCAAACACTTTGTCATCTGCTTTGCTAATGCTTCATTAACTAGCACATACAttagaaacttttgttttgttgatttcaAATTCATAGATTTCTGTTTCtaacttgttttctttttttttcctaatcTTCAGACCACCAAAGCTGCCTGTTGTGGTCTCTGGAGTTGTCACTAAGGGAGATAAAGACTTCACCCCTGCTGCTGCCCAGGTGGCCCATCAGAAACCTGTGCCTTCAGCACAGAAGCTGCCTGCTGGCCAGCACCTTAACCAGCACATCCACCAGCCCAGGAAATGAGCCTTCAGCCGCTCCAGAACATCACGGGCCCCCCCACATGGGGCCAGGACCACACCACCCCAAACACCTGCTCAGGTTGCCAGGGTTCTCTTGCCGTCAAACATTCCTTACGCCCCCTCCCCCTCCCTCCGTCTGTGCCTGCAAGTGTCCATTTTCGACCAGTATCATgacaaacattcattttcttgtttcgTATCTGTAAATCATCGCAACACTAAAAATCGAAGGCTTCATTGCAGATCGCCAATCAGAAACATTCTAATTCCATGGGTTCATTTCATGAGGGATTTGtggatgttttattttcttttttaattttacatgaaTCGTTCCAGAGAGATGTAAATTgtataaatcagttttgttttgtttttttgaagttGGTGAATGTTGTATATTAGGCATTAGGTACTAGGTGTGGCTATCTGATATCTGAATAAAGAGTTAATATAAAACC
>TCONS_00046365
GTTTTTCCTAGCTTGTACTCTCTGTGTTGCTTAGACATCCCACACTAATCCAGAATATTTAACATGATGATGCAGTCTCTCTTAGTGGCCATCTGTCTCCTAATGAGTAAGAGCGAAGACCACCAAAGCTGCCTGTTGTGGTCTCTGGAGTTGTCACTAAGGGAGATAAAGACTTCACCCCTGCTGCTGCCCAGGTGGCCCATCAGAAACCTGTGCCTTCAGCACAGAAGCTGCCTGCTGGCCAGCACCTTAACCAGCACATCCACCAGCCCAGGAAATGAGCCTTCAGCCGCTCCAGAACATCACGGGCCCCCCCACATGGGGCCAGGACCACACCACCCCAAACACCTGCTCAGGTTGCCAGGGTTCTCTTGCCGTCAAACATTCCTTACGCCCCCTCCCCCTCCCTCCGTCTGTGCCTGCAAGTGTCCATTTTCGACCAGTATCATgacaaacattcattttcttgtttcgTATCTGTAAATCATCGCAACACTAAAAATCGAAGGCTTCATTGCAGATCGCCAATCAGAAACATTCTAATTCCATGGGTTCATTTCATGAGGGATTTGtggatgttttattttcttttttaattttacatgaaTCGTTCCAGAGAGATGTAAATTgtataaatcagttttgttttgtttttttgaagttGGTGAATGTTGTATATTAGGCATTAGGTACTAGGTGTGGCTATCTGATATCTGAATAAAGAGTTAATATAAAACC

Function

symbol description
dap Predicted to enable death domain binding activity. Predicted to be involved in apoptotic signaling pathway; cellular response to amino acid starvation; and negative regulation of autophagy. Orthologous to human DAP (death associated protein).

GO:

id name namespace
GO:0034198 cellular response to amino acid starvation biological_process
GO:0097190 apoptotic signaling pathway biological_process
GO:0010507 negative regulation of autophagy biological_process
GO:0070513 death domain binding molecular_function

KEGG:

id description
ko01002 Peptidases and inhibitors

ZFIN:

id description
ZDB-GENE-000511-3 Predicted to enable death domain binding activity. Predicted to be involved in apoptotic signaling pathway; cellular response to amino acid starvation; and negative regulation of autophagy. Orthologous to human DAP (death associated protein).

Ensembl:

ensembl_id ENSDARG00000000069

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00046364 False 1859 mRNA 0.38 4 22070290 22103585
TCONS_00046366 False 615 lncRNA 0.46 2 22071221 22074272
TCONS_00046367 False 895 lncRNA 0.42 2 22071221 22077479
TCONS_00046365 True 738 processed_transcript 0.45 3 22071221 22097763

Neighbor

gene id symbol gene type direction distance location
XLOC_023442 NA coding downstream 3459 22053809 ~ 22066831 (-)
XLOC_023441 si:rp71-1f1.6 coding downstream 54539 22014810 ~ 22015751 (-)
XLOC_023440 si:rp71-1f1.5 coding downstream 67259 22002090 ~ 22003031 (-)
XLOC_023439 si:rp71-1f1.4 coding downstream 78520 21990964 ~ 21991770 (-)
XLOC_023438 apoob coding downstream 80884 21978230 ~ 21989406 (-)
XLOC_023444 ctnnd2a coding upstream 15219 22118804 ~ 22732001 (-)
XLOC_023445 AL590147.1 coding upstream 205359 22308944 ~ 22309058 (-)
XLOC_023446 CT573489.1 coding upstream 268401 22371986 ~ 22372100 (-)
XLOC_023447 zc2hc1a coding upstream 636958 22740543 ~ 22756566 (-)
XLOC_023448 NA coding upstream 775356 22878941 ~ 23218030 (-)
XLOC_023665 dre-mir-735 misc upstream 16074376 38177961 ~ 38178027 (-)
XLOC_023437 AL627129.1 non-coding downstream 107122 21963052 ~ 21963168 (-)
XLOC_023407 NA non-coding downstream 1538477 20450027 ~ 20531813 (-)
XLOC_023401 BX247944.1 non-coding downstream 1882860 20187316 ~ 20187430 (-)
XLOC_023400 NA non-coding downstream 1885265 20181997 ~ 20185025 (-)
XLOC_023450 CT573302.1 non-coding upstream 1169657 23273242 ~ 23273359 (-)
XLOC_023451 NA non-coding upstream 1279527 23383112 ~ 23642905 (-)

Expression


Co-expression Network