G420837



Basic Information


Item Value
gene id G420837
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 58670050 ~ 58670597 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU476921
ATCTGAGTtatagttgatgaacagcattctcacataggtattcctcttgtccaggcgGGACAGCGGGATGTGCAGTGCAACAGCGACTGCGTCGTTTGTGGATCTATATGCATATTGTAATGGTTCAAGGGTGTCGGGTATGGTGAAggggatatggtccttgactagcctctcaaagcacttcatgatgacagatagtaatttagttcagtgtgcttcggtacaggaacaatggtggccatctagAAGCAAGTTGGATGACAGATTGGGATattgagaggttgaaaatgttcgtaaacactccagccagctggtctgcgcatgctcagaGAACGCGGcttgggatgccatctgggctggtagccttgcgagggttaacatatTTGAAGGTCCTACTCACATTGACTACAGAGATTGGGAGCCCAGTCTTCGTGAGCAGCGGGGGACCATGTCATCGACTCTGTGTTGTTTTCCTCAAAGCAGCCGAAAAGTGTGTATACTTTGAGAAGGTTAGAGTGGAACAGCCCATACGAAAAAGTAATATATGA

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU476921 True 548 lncRNA 0.47 1 58670050 58670597

Neighbor


gene id symbol gene type direction distance location
LOC110524152 LOC100194657 coding downstream 91439 58573258 ~ 58578611 (-)
LOC110524151 LOC106573894 coding downstream 102367 58546384 ~ 58567683 (-)
mast3b LOC106613636 coding downstream 194817 58416872 ~ 58475233 (-)
LOC110524144 LOC106613635 coding downstream 260730 58379780 ~ 58409320 (-)
LOC118964716 LOC106613467 coding downstream 290005 58377558 ~ 58380045 (-)
LOC110524158 LOC106613645 coding upstream 874 58671471 ~ 58675928 (-)
LOC110524167 LOC106613995 coding upstream 163665 58834262 ~ 58836111 (-)
gamt gamt coding upstream 181422 58852019 ~ 58856447 (-)
LOC118964628 NA coding upstream 312091 58982688 ~ 59001580 (-)
trnaa-ugc-13 NA coding upstream 355929 59026526 ~ 59026598 (-)
G420833 NA non-coding downstream 5091 58664692 ~ 58664959 (-)
G420832 NA non-coding downstream 5393 58664438 ~ 58664657 (-)
G420828 NA non-coding downstream 10508 58659278 ~ 58659542 (-)
G420825 NA non-coding downstream 12643 58657114 ~ 58657407 (-)
G420809 NA non-coding downstream 50019 58619453 ~ 58620031 (-)
G420843 NA non-coding upstream 13309 58683906 ~ 58684177 (-)
G420844 NA non-coding upstream 14982 58685579 ~ 58685920 (-)
G420846 NA non-coding upstream 17965 58688562 ~ 58688785 (-)
G420847 NA non-coding upstream 18339 58688936 ~ 58689211 (-)
G420850 LOC106613644 non-coding upstream 21620 58692217 ~ 58694635 (-)
G420421 NA other downstream 255907 58413128 ~ 58414143 (-)
G420193 NA other downstream 555990 58112387 ~ 58114060 (-)
G419714 NA other downstream 964114 57699745 ~ 57705936 (-)
LOC110524128 LOC107602773 other downstream 1043876 57612040 ~ 57627128 (-)
G419603 NA other downstream 1058483 57611059 ~ 57611567 (-)
G420982 LOC106613655 other upstream 355506 59026103 ~ 59036299 (-)
lsg1 lsg1 other upstream 462273 59131152 ~ 59138429 (-)
G422347 NA other upstream 1430168 60100765 ~ 60101056 (-)
LOC110524239 LOC106573579 other upstream 2388397 61058949 ~ 61081864 (-)
G424474 NA other upstream 2946273 61616870 ~ 61617244 (-)

Expression



Co-expression Network