G420847



Basic Information


Item Value
gene id G420847
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 58688936 ~ 58689211 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU476931
CATGGGGGAGACCTATTCTTTTCTTTTGGTTTGTTATtcaaataaacacccttgaaaccgagctaatccttctctgtccgtgtctgatctgtgtaaacgttttcaccaaaccccctggtctgccacaagtGGTGGAGAATGCGGGCAATCTGATAACATGGTCAGATCAGGGTTGACGTTTACGAAGCATCAGCATGGACGAGTTGATAGCTCAGTTAGTCTGGGCCCAACAAGCCCAACAGGCGGTTCAGGAACGAACCCTGAAGGAACAGCGGC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU476931 True 276 lncRNA 0.49 1 58688936 58689211

Neighbor


gene id symbol gene type direction distance location
LOC110524158 LOC106613645 coding downstream 13008 58671471 ~ 58675928 (-)
LOC110524152 LOC100194657 coding downstream 110325 58573258 ~ 58578611 (-)
LOC110524151 LOC106573894 coding downstream 121253 58546384 ~ 58567683 (-)
mast3b LOC106613636 coding downstream 213703 58416872 ~ 58475233 (-)
LOC110524144 LOC106613635 coding downstream 279616 58379780 ~ 58409320 (-)
LOC110524167 LOC106613995 coding upstream 145051 58834262 ~ 58836111 (-)
gamt gamt coding upstream 162808 58852019 ~ 58856447 (-)
LOC118964628 NA coding upstream 293477 58982688 ~ 59001580 (-)
trnaa-ugc-13 NA coding upstream 337315 59026526 ~ 59026598 (-)
atp13a3 LOC106613657 coding upstream 365909 59055120 ~ 59115105 (-)
G420846 NA non-coding downstream 151 58688562 ~ 58688785 (-)
G420844 NA non-coding downstream 3016 58685579 ~ 58685920 (-)
G420843 NA non-coding downstream 4759 58683906 ~ 58684177 (-)
G420837 NA non-coding downstream 18339 58670050 ~ 58670597 (-)
G420833 NA non-coding downstream 23977 58664692 ~ 58664959 (-)
G420850 LOC106613644 non-coding upstream 3006 58692217 ~ 58694635 (-)
G420860 NA non-coding upstream 19571 58708782 ~ 58709233 (-)
G420879 NA non-coding upstream 61965 58751176 ~ 58753528 (-)
G420894 LOC106613647 non-coding upstream 86770 58775981 ~ 58776677 (-)
G420921 LOC106613648 non-coding upstream 119823 58809034 ~ 58828570 (-)
G420421 NA other downstream 274793 58413128 ~ 58414143 (-)
G420193 NA other downstream 574876 58112387 ~ 58114060 (-)
G419714 NA other downstream 983000 57699745 ~ 57705936 (-)
LOC110524128 LOC107602773 other downstream 1062762 57612040 ~ 57627128 (-)
G419603 NA other downstream 1077369 57611059 ~ 57611567 (-)
G420982 LOC106613655 other upstream 336892 59026103 ~ 59036299 (-)
lsg1 lsg1 other upstream 443659 59131152 ~ 59138429 (-)
G422347 NA other upstream 1411554 60100765 ~ 60101056 (-)
LOC110524239 LOC106573579 other upstream 2369783 61058949 ~ 61081864 (-)
G424474 NA other upstream 2927659 61616870 ~ 61617244 (-)

Expression



Co-expression Network