Gene
RNA
| Item | Value |
|---|---|
| gene id | G420924 |
| gene name | LOC106613648 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 58822575 ~ 58823502 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU477016 | True | 655 | lncRNA | 0.41 | 3 | 58822575 | 58823502 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524158 | LOC106613645 | coding | downstream | 146647 | 58671471 ~ 58675928 (-) |
| LOC110524152 | LOC100194657 | coding | downstream | 243964 | 58573258 ~ 58578611 (-) |
| LOC110524151 | LOC106573894 | coding | downstream | 254892 | 58546384 ~ 58567683 (-) |
| mast3b | LOC106613636 | coding | downstream | 347342 | 58416872 ~ 58475233 (-) |
| LOC110524144 | LOC106613635 | coding | downstream | 413255 | 58379780 ~ 58409320 (-) |
| LOC110524167 | LOC106613995 | coding | upstream | 10760 | 58834262 ~ 58836111 (-) |
| gamt | gamt | coding | upstream | 28517 | 58852019 ~ 58856447 (-) |
| LOC118964628 | NA | coding | upstream | 159186 | 58982688 ~ 59001580 (-) |
| trnaa-ugc-13 | NA | coding | upstream | 203024 | 59026526 ~ 59026598 (-) |
| atp13a3 | LOC106613657 | coding | upstream | 231618 | 59055120 ~ 59115105 (-) |
| G420894 | LOC106613647 | non-coding | downstream | 45898 | 58775981 ~ 58776677 (-) |
| G420879 | NA | non-coding | downstream | 69047 | 58751176 ~ 58753528 (-) |
| G420860 | NA | non-coding | downstream | 113342 | 58708782 ~ 58709233 (-) |
| G420850 | LOC106613644 | non-coding | downstream | 127940 | 58692217 ~ 58694635 (-) |
| G420847 | NA | non-coding | downstream | 133364 | 58688936 ~ 58689211 (-) |
| G420948 | LOC106573879 | non-coding | upstream | 18083 | 58841585 ~ 58842095 (-) |
| G420951 | NA | non-coding | upstream | 41597 | 58865099 ~ 58865767 (-) |
| G420939 | NA | non-coding | upstream | 43904 | 58867406 ~ 58868675 (-) |
| G420932 | NA | non-coding | upstream | 45316 | 58868818 ~ 58870227 (-) |
| G420940 | NA | non-coding | upstream | 46873 | 58870375 ~ 58871526 (-) |
| G420421 | NA | other | downstream | 408432 | 58413128 ~ 58414143 (-) |
| G420193 | NA | other | downstream | 708515 | 58112387 ~ 58114060 (-) |
| G419714 | NA | other | downstream | 1116639 | 57699745 ~ 57705936 (-) |
| LOC110524128 | LOC107602773 | other | downstream | 1196401 | 57612040 ~ 57627128 (-) |
| G419603 | NA | other | downstream | 1211008 | 57611059 ~ 57611567 (-) |
| G420982 | LOC106613655 | other | upstream | 202601 | 59026103 ~ 59036299 (-) |
| lsg1 | lsg1 | other | upstream | 309368 | 59131152 ~ 59138429 (-) |
| G422347 | NA | other | upstream | 1277263 | 60100765 ~ 60101056 (-) |
| LOC110524239 | LOC106573579 | other | upstream | 2235492 | 61058949 ~ 61081864 (-) |
| G424474 | NA | other | upstream | 2793368 | 61616870 ~ 61617244 (-) |
