G420621


Basic Information

Item Value
gene id G420621
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 58831388 ~ 58831587 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU476680
cgacgggtatacagagatgaccagtttacagaggagtatagagtgcagtgatgtgtcctataaggagcattggtggcaaatctgatggccaaatggtaaagaacatctagccgctggAGAGCACCCTTAACTGCGATCTATGAATTAcgtctataaattacgtctccgtaatttagcatgggtaggatggtcatctaaTC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU476680 True 200 lncRNA 0.44 1 58831388 58831587

Neighbor

gene id symbol gene type direction distance location
LOC110524164 LOC106613648 coding upstream 2883 58808570 ~ 58828505 (+)
LOC110524163 LOC106613647 coding upstream 28725 58756244 ~ 58802663 (+)
LOC110522978 r3hdm4 coding upstream 55046 58747592 ~ 58776342 (+)
LOC110524162 LOC106613646 coding upstream 95396 58726531 ~ 58735992 (+)
LOC110524161 LOC106613992 coding upstream 120408 58699995 ~ 58710980 (+)
LOC110524166 LOC100194687 coding downstream 10862 58842449 ~ 58849428 (+)
LOC110524168 LOC106613649 coding downstream 31482 58863069 ~ 58878412 (+)
LOC110522979 NA coding downstream 56627 58888214 ~ 58900154 (+)
LOC110524169 LOC106613650 coding downstream 80322 58911909 ~ 58936361 (+)
ndufa7 ndufa7 coding downstream 105238 58936825 ~ 58940467 (+)
G420610 NA non-coding upstream 26090 58805079 ~ 58805298 (+)
G420608 NA non-coding upstream 27180 58803982 ~ 58804208 (+)
G420606 NA non-coding upstream 28295 58802894 ~ 58803093 (+)
G420545 NA non-coding upstream 151524 58679586 ~ 58679864 (+)
LOC110524159 NA non-coding upstream 161413 58661910 ~ 58669975 (+)
G420622 NA non-coding downstream 804 58832391 ~ 58832640 (+)
G420629 NA non-coding downstream 26058 58857645 ~ 58857865 (+)
G420642 NA non-coding downstream 65313 58896900 ~ 58897108 (+)
G420656 NA non-coding downstream 110019 58941606 ~ 58942640 (+)
G420659 NA non-coding downstream 115882 58947469 ~ 58947677 (+)
G420117 LOC100846954 other upstream 414612 58411240 ~ 58418268 (+)
G419452 NA other upstream 931740 57884380 ~ 57899648 (+)
LOC110524119 LOC106613607 other upstream 1464051 57352343 ~ 57367627 (+)
LOC100135807 LOC106613594 other upstream 1873223 56943838 ~ 56958165 (+)
G418251 rtca other upstream 1906212 56923924 ~ 56925176 (+)
G420634 NA other downstream 111141 58942728 ~ 58944217 (+)
LOC110524226 LOC106573564 other downstream 1862670 60694220 ~ 60695905 (+)
G423922 NA other downstream 2889950 61721537 ~ 61722024 (+)
G424079 NA other downstream 3273936 62105523 ~ 62105872 (+)
LOC110524265 LOC106613745 other downstream 3451565 62283054 ~ 62327772 (+)

Expression


Co-expression Network