G420933



Basic Information


Item Value
gene id G420933
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 58877285 ~ 58878292 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU477025
ATTTTTCGTACAAAATTCTCTTTAAAAAAATTGCAGTTTGTGTATAATATATATTCATATTTTCCAAACTTTAAAATAAAGACTCAGAAAATAAACACAATCCaccaaattaaaaacattttccctAAAATTTAAAGCTGAGAACTTTAGACCCTGTTTTCAGTTCTGTATCTGGCATAAATAtacatatgtctctctctctctctctatatatatagatatattctCTGTGCTAGTGTTTGACCAGACAATCAAAACCTATTGCAAAGTAGTAAAGTCCTACTTTAAAACATGTGGGGAGAAACAAAGTTCCTTTCATTTCAACATTTGAAAGAAAGGTTATGCAAAAATCAACTTTTACATCATGTGACATTGTAACAGAAGTAAATTGGAATCCCTGGTTTTATGAGAGTTCACTTTTCCCCCCAAATTGTGTCATTTTGTGTTCCAAAAAACAAACACAGAAATCCAGTTTTGCTTATGACCAGAACACATTTCCCTGACTTTAGAACTGAGCGCTGTGGCGGTCGGAGACGCTCAGCGTCGGTATGGATGAAAGCCCGTTACGTTGTGATTCTGTCCTCGAGCAAAAGCGGCTGCTGTCGGCTGGGGGCCCGCCACCGGTTGTGCTGTTGGTGCCCCGTATGAAGCGGTCTGCTGGCTGGGATCTGCGAAAGTATGGCCAAACCCACTCAGGTCCTGACCATAACCTGTGAGGGTGGGTGAAGAACAGGGAAGAAGGGTTCATTATCACAATCATAAATGGTGCTCATAAACAAACAGATTCCAACCAGCTAGGTGAAAGTCCCTTATTTTACCCAAAATAAATACAGCATTGATCATGGTTTCAGGGCTTCTAATGTTCATGTTAAATATTGTCTTCCATCCTTCATGAGCCTCCATGAACCAACATTCTGAGTTTGGTTAGCCAGTTGAGTGCTTCCAGTGTAAATCAATTGGTCTATTATTTTTAGGATTCAAAAGATGCAATCTGAACTGTTATGAGAG

Function


NR:

description
DAZ-associated protein 1-like isoform X3

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU477025 True 1008 lncRNA 0.39 1 58877285 58878292

Neighbor


gene id symbol gene type direction distance location
gamt gamt coding downstream 20838 58852019 ~ 58856447 (-)
LOC110524167 LOC106613995 coding downstream 41174 58834262 ~ 58836111 (-)
LOC110524158 LOC106613645 coding downstream 201357 58671471 ~ 58675928 (-)
LOC110524152 LOC100194657 coding downstream 298674 58573258 ~ 58578611 (-)
LOC110524151 LOC106573894 coding downstream 309602 58546384 ~ 58567683 (-)
LOC118964628 NA coding upstream 104396 58982688 ~ 59001580 (-)
trnaa-ugc-13 NA coding upstream 148234 59026526 ~ 59026598 (-)
atp13a3 LOC106613657 coding upstream 176828 59055120 ~ 59115105 (-)
tmem44 tmem44 coding upstream 246789 59125081 ~ 59131011 (-)
lsg1 lsg1 coding upstream 252860 59131152 ~ 59138429 (-)
G420938 NA non-coding downstream 1794 58874502 ~ 58875491 (-)
G420937 NA non-coding downstream 4150 58871647 ~ 58873135 (-)
G420940 NA non-coding downstream 5759 58870375 ~ 58871526 (-)
G420932 NA non-coding downstream 7058 58868818 ~ 58870227 (-)
G420939 NA non-coding downstream 8610 58867406 ~ 58868675 (-)
G420953 NA non-coding upstream 1905 58880197 ~ 58880430 (-)
G420956 NA non-coding upstream 4202 58882494 ~ 58882707 (-)
G420963 NA non-coding upstream 20145 58898437 ~ 58898885 (-)
G420964 NA non-coding upstream 20861 58899153 ~ 58902748 (-)
G420968 NA non-coding upstream 28771 58907063 ~ 58907344 (-)
G420421 NA other downstream 463142 58413128 ~ 58414143 (-)
G420193 NA other downstream 763225 58112387 ~ 58114060 (-)
G419714 NA other downstream 1171349 57699745 ~ 57705936 (-)
LOC110524128 LOC107602773 other downstream 1251111 57612040 ~ 57627128 (-)
G419603 NA other downstream 1265718 57611059 ~ 57611567 (-)
G420982 LOC106613655 other upstream 147811 59026103 ~ 59036299 (-)
G422347 NA other upstream 1222473 60100765 ~ 60101056 (-)
LOC110524239 LOC106573579 other upstream 2180702 61058949 ~ 61081864 (-)
G424474 NA other upstream 2738578 61616870 ~ 61617244 (-)

Expression



Co-expression Network