G420964


Basic Information

Item Value
gene id G420964
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 58899153 ~ 58902748 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU477057
aaatacagtgtagacattgttaatgttgtaaatgactattgtagctggaaacggcagacctttaatggaatatctacatactgtaggcgtacagaggcccattatcagcaaccatcactcctgtgttccaatggcacgtggtgttagctaatccaagttgatcatttcaaaaggataattgatcattagcaaacccttttgcaattatgttagcacagctggaaactgGTGGTACAAGCAGTGGCAGTGCGAGAAATAAGGTGAAGTTCAAGCTCAGACAATTGTGGTATTTTGAGGAAGCTGCATTTTTCAAAACAAGTGGTGACAGCTTTCGACACGCATTAGACACTTCTGGGTTTGTTTTGATAAGCCTAGTATGTAAAACATGAGAGGATGTTTATTTGTTCCAATCTATAGTTTTATGGTGTTCTGTTCCATCAATGGCACTTTTGACTAAACATTTGACTTGAAATACTGTAATGACAAGGTTTTAAACATATTGAAATATAGATTTATGTAGTTGCTCATGGCAATGGCCTATTATGCTTAAAAATCCAATATGTCAGTGAAAGGCAGCAGGCAATTTGACAGCATCTTTGGTTGtacgatcttaatttgatcaccctgtttttGTACATGAATCAAAAATCCTAATCTACTCCATCCTACGGCCATTATGGCCAAGGGTAAATGCGAATACACTTCAAAACCTGTTATTATGGGTTTAGCCATCGGACCTAACTAGTTGTACAGCACTCCAGCTGTGCATGATGAAAGACTTCTGGCACGTGATATCATCTTTACCTTTCACACACTGACCTGCAATTGAAAAACAGTAACAATAGTTTTTATTACTCTGCTAGAAATGTTGTAACTACCTTATATATCTAGTTTGGATTATTTGTCTTTGAAACAAACtatttttttgcaaaaaacaaagtgatcaaattaagatcatacaaCTGTACAACCAAAGATGCTGTCAAATTGCCTGGTGGTCAAGTCATAGGTGGATCAAGGTTCATTAGACCTTCAGTATAAGAATATTCAACTTTTTTGTACAATATTGTACAAACAATACTGAGGTTGTGAGGTCAAATTCAGAACTTCTTTTGCCAATTTGTTAGCAGAATTATCACACATGTTATTATTCATAATAACATTTGCCTTTTGTGTGGCGATCCTGCAGGAACATCCCTTTCACTAAGGATCAATGTCATATTTCACTGTTTTAGTGGTACTTTTTCAGTCAAACTGACTGATGCATTATAGCACTTACACCCTTTGAAAGGGTCCAACTGTTGTGAAATTTTTCATATTTAGTCTGTGGTAAAAATGTGAGTTACTGAATGTCATATCGTCATCTATACCTTCAATAGTAATAAATGCTTTGAATGTATAACACAAACTAAATATCTTAAATAAAATATCATTGCGAGTTGTATTTGAAATGGTTGATTGTTTGGGTGAAATTGGGCCTTAGAAAGTTCTTAGAAAATCGATTGTGACTTATTTTGTCTGGATGCTGCAGGTTCATATAGTTGTACTCTGTACAGTatcataaacaaacatacagctcCCCCTAGTGAAATAACTGATAATACACAACTACACtcaccggacagtttattaggtacacccatctagtaccgagTCGGACTCTCCTTAcatccagaacagcctgaattctttggggcGTGGATTCTACAAATTGGGTGCTGACACGATGGCATCacacagttgctgcagattggacagcAGTACACCAcagccaccagcctgtaccatcGACACAAGGTAGGATGGGTCGATCATGCTTTCACCAAATCCTAAGTCTGCCATCAGCTTGACGCAACAAGAACCAAGATTCATCGGACCAGGCAATGCTTTTCCACTCAATtctccagtgttggtgatcgcattCCCAATGGAGTCGTTTTTtccttgtttttagctgataggagtggaacccagtgtgtcgtctgctgcaatagctcatccgtgacaaggatcgaCGAGTTGTACTGAgccattatttgtctgtttgtggcccgcctgttatcTTGCACAATTTTTCTTGAACCTCtcattctccttcaacctctcatcgacgagctgttttcgccccaggactgccactgactggatcatttctgtttgtcgcaccattctctgtaaaccctagacacggTCGTGCGCAAAAGCCCAGGACCGAGGCCGTTTCTGAGATGGCGTGCCTGGCACTGAccatcataccacgctcaaagtcgcttCGGTCACTGTTTTTTtcccattctaatgttcaatcgaACGGTAACTGAATGCCCCGATGCCCGTCTGCCTACTTTaaatagcaagccacggccacgtgactcactgtctgtaggagctatCCATTTTTGTGAACGGGGTACCGACGGGGTGCCAGTGAAAGGTTTCAAAGCATGAGTTGCTACATTGACACTATTCATAAATAAACAGTTGTAGGTAGTAGTGCGTGGTTTCACGCCGCAGTGGTCAGGCTATTTTGCTCACCACACAAAACCGTGTAATCCACCATGACGCAAGACAGCATAGTCTAAAGTATTAACAAACAAGAAGAACAAAAATGGGGATAAGTGCATACGTGTATGTGTTAGCAATGCTTGTGTGTCATCACCAGGTGCAGTCTTAAGCCACTGACGGGAGAAGAAACAAAGACACATTTGGTAGTGAGAGTTCCTGAGGAGGAGTTTTGGTAGTGAGAGTTCCTGAGGAGGAGTTTTGGTAGTGAGAGTTCCTGAGGAGGAGTTTTGGTAGTGAGAGTTCCTGAGGAGGAGTTTTGCTAATGAGAGTTCCTGAGGAGGAGTTTTGGTAGTGAGAGTTCCTGAGGAGGAGTTTTGGTAGTGAGAGTTCCTGAGGAGGAGTTTTGGTAGTGAGAGTTCCTGAGGAGGAGTTTTGGTAGTGAGAGTTCATGGGGTGGAGTTTTGCTAACAGGGTGTGGCACAAAAATCCCAAATAAAACACCAAATCACTCCTAGATGCTGAAAGCCTGTTTCTCAAAATGCTCCGCTTTTTTCACTCTTCTCCTTCTTTACAGCCATTGTCCAGTTAAAAACTGATAGGCGACACATTTCTGCTCTCGGCCTgggcgcgggggggggggggcgggggtgaCATTGGGCaatggggggaggagaggtgggctCTTTCCGTTCAACTGCAGCCCTCATCAGAGGTACTGCTGGAGGAAGTGCAGCAGCATAATCTCATAGTACTCTCCAGACTTTGGGCAGCGGATGCTGTGTCTCTCGTCGGGGTAGATCTGAA
>TU477058
aaatacagtgtagacattgttaatgttgtaaatgactattgtagctggaaacggcagacctttaatggaatatctacatactgtaggcgtacagaggcccattatcagcaaccatcactcctgtgttccaatggcacgtggtgttagctaatccaagttgatcatttcaaaaggataattgatcattagcaaacccttttgcaattatgttagcacagctggaaactgGTGGTACAAGCAGTGGCAGTGCGAGAAATAAGGTGAAGTTCAAGCTCAGACAATTGTGGTATTTTGAGGAAGCTGCATTTTTCAAAACAAGTGGTGACAGCTTTCGACACGCATTAGACACTTCTGGGTTTGTTTTGATAAGCCTAGTATGTAAAACATGAGAGGATGTTTATTTGTTCCAATCTATAGTTTTATGGTGTTCTGTTCCATCAATGGCACTTTTGACTAAACATTTGACTTGAAATACTGTAATGACAAGGTTTTAAACATATTGAAATATAGATTTATGTAGTTGCTCATGGCAATGGCCTATTATGCTTAAAAATCCAATATGTCAGTGAAAGGCAGCAGGCAATTTGACAGCATCTTTGGTTGtacgatcttaatttgatcaccctgtttttGTACATGAATCAAAAATCCTAATCTACTCCATCCTACGGCCATTATGGCCAAGGGTAAATGCGAATACACTTCAAAACCTGTTATTATGGGTTTAGCCATCGGACCTAACTAGTTGTACAGCACTCCAGCTGTGCATGATGAAAGACTTCTGGCACGTGATATCATCTTTACCTTTCACACACTGACCTGCAATTGAAAAACAGTAACAATAGTTTTTATTACTCTGCTAGAAATGTTGTAACTACCTTATATATCTAGTTTGGATTATTTGTCTTTGAAACAAACtatttttttgcaaaaaacaaagtgatcaaattaagatcatacaaCTGTACAACCAAAGATGCTGTCAAATTGCCTGGTGGTCAAGTCATAGGTGGATCAAGGTTCATTAGACCTTCAGTATAAGAATATTCAACTTTTTTGTACAATATTGTACAAACAATACTGAGGTTGTGAGGTCAAATTCAGAACTTCTTTTGCCAATTTGTTAGCAGAATTATCACACATGTTATTATTCATAATAACATTTGCCTTTTGTGTGGCGATCCTGCAGGAACATCCCTTTCACTAAGGATCAATGTCATATTTCACTGTTTTAGTGGTACTTTTTCAGTCAAACTGACTGATGCATTATAGCACTTACACCCTTTGAAAGGGTCCAACTGTTGTGAAATTTTTCATATTTAGTCTGTGGTAAAAATGTGAGTTACTGAATGTCATATCGTCATCTATACCTTCAATAGTAATAAATGCTTTGAATGTATAACACAAACTAAATATCTTAAATAAAATATCATTGCGAGTTGTATTTGAAATGGTTGATTGTTTGGGTGAAATTGGGCCTTAGAAAGTTCTTAGAAAATCGATTGTGACTTATTTTGTCTGGATGCTGCAGGTTCATATAGTTGTACTCTGTACAGTatcataaacaaacatacagctcCCCCTAGTGAAATAACTGATAATACACAACTACACtcaccggacagtttattaggtacacccatctagtaccgagTCGGACTCTCCTTAcatccagaacagcctgaattctttggggcGTGGATTCTACAAATTGGGTGCTGACACGATGGCATCacacagttgctgcagattggacagcAGTACACCAcagccaccagcctgtaccatcGACACAAGGTAGGATGGGTCGATCATGCTTTCACCAAATCCTAAGTCTGCCATCAGCTTGACGCAACAAGAACCAAGATTCATCGGACCAGGCAATGCTTTTCCACTCAATtctccagtgttggtgatcgcattCCCAATGGAGTCGTTTTTtccttgtttttagctgataggagtggaacccagtgtgtcgtctgctgcaatagctcatccgtgacaaggatcgaCGAGTTGTACTGAgccattatttgtctgtttgtggcccgcctgttatcTTGCACAATTTTTCTTGAACCTCtcattctccttcaacctctcatcgacgagctgttttcgccccaggactgccactgactggatcatttctgtttgtcgcaccattctctgtaaaccctagacacggTCGTGCGCAAAAGCCCAGGACCGAGGCCGTTTCTGAGATGGCGTGCCTGGCACTGAccatcataccacgctcaaagtcgcttCGGTCACTGTTTTTTtcccattctaatgttcaatcgaACGGTAACTGAATGCCCCGATGCCCGTCTGCCTACTTTaaatagcaagccacggccacgtgactcactgtctgtaggagctatCCATTTTTGTGAACGGGGTACCGACGGGGTGCCAGTGAAAGGTTTCAAAGCATGAGTTGCTACATTGACACTATTCATAAATAAACAGTTGTAGGTAGTAGTGCGTGGTTTCACGCCGCAGTGGTCAGGCTATTTTGCTCACCACACAAAACCGTGTAATCCACCATGACGCAAGACAGCATAGTCTAAAGTATTAACAAACAAGAAGAACAAAAATGGGGATAAGTGCATACGTGTATGTGTTAGCAATGCTTGTGTGTCATCACCAGGTGCAGTCTTAAGCCACTGACGGGAGAAGAAACAAAGACACATTTGGTAGTGAGAGTTCCTGAGGAGGAGTTTTGGTAGTGAGAGTTCCTGAGGAGGAGTTTTGGTAGTGAGAGTTCCTGAGGAGGAGTTTTGGTAGTGAGAGTTCCTGAGGAGGAGTTTTGGTAGTGAGAGTTCATGGGGTGGAGTTTTGCTAACAGGGTGTGGCACAAAAATCCCAAATAAAACACCAAATCACTCCTAGATGCTGAAAGCCTGTTTCTCAAAATGCTCCGCTTTTTTCACTCTTCTCCTTCTTTACAGCCATTGTCCAGTTAAAAACTGATAGGCGACACATTTCTGCTCTCGGCCTgggcgcgggggggggggggcgggggtgaCATTGGGCaatggggggaggagaggtgggctCTTTCCGTTCAACTGCAGCCCTCATCAGAGGTACTGCTGGAGGAAGTGCAGCAGCATAATCTCATAGTACTCTCCAGACTTTGGGCAGCGGATGCTGTGTCTCTCGTCGGGGTAGATCTGAA

Function

NR:

description
PREDICTED: acidic leucine-rich nuclear phosphoprotein 32 family member B-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU477057 False 3309 lncRNA 0.42 2 58899153 58902748
TU477058 True 3193 lncRNA 0.42 2 58899153 58902748

Neighbor

gene id symbol gene type direction distance location
gamt gamt coding downstream 42706 58852019 ~ 58856447 (-)
LOC110524167 LOC106613995 coding downstream 63042 58834262 ~ 58836111 (-)
LOC110524158 LOC106613645 coding downstream 223225 58671471 ~ 58675928 (-)
LOC110524152 LOC100194657 coding downstream 320542 58573258 ~ 58578611 (-)
LOC110524151 LOC106573894 coding downstream 331470 58546384 ~ 58567683 (-)
LOC118964628 NA coding upstream 79940 58982688 ~ 59001580 (-)
trnaa-ugc-13 NA coding upstream 123778 59026526 ~ 59026598 (-)
atp13a3 LOC106613657 coding upstream 152372 59055120 ~ 59115105 (-)
tmem44 tmem44 coding upstream 222333 59125081 ~ 59131011 (-)
lsg1 lsg1 coding upstream 228404 59131152 ~ 59138429 (-)
G420963 NA non-coding downstream 268 58898437 ~ 58898885 (-)
G420956 NA non-coding downstream 16446 58882494 ~ 58882707 (-)
G420953 NA non-coding downstream 18723 58880197 ~ 58880430 (-)
G420933 NA non-coding downstream 20861 58877285 ~ 58878292 (-)
G420938 NA non-coding downstream 23662 58874502 ~ 58875491 (-)
G420968 NA non-coding upstream 4315 58907063 ~ 58907344 (-)
G420992 NA non-coding upstream 47009 58949757 ~ 58949993 (-)
G421034 NA non-coding upstream 142622 59045370 ~ 59045647 (-)
G420981 NA non-coding upstream 144957 59047705 ~ 59053737 (-)
G421077 NA non-coding upstream 218312 59121060 ~ 59121285 (-)
G420421 NA other downstream 485010 58413128 ~ 58414143 (-)
G420193 NA other downstream 785093 58112387 ~ 58114060 (-)
G419714 NA other downstream 1193217 57699745 ~ 57705936 (-)
LOC110524128 LOC107602773 other downstream 1272979 57612040 ~ 57627128 (-)
G419603 NA other downstream 1287586 57611059 ~ 57611567 (-)
G420982 LOC106613655 other upstream 123355 59026103 ~ 59036299 (-)
G422347 NA other upstream 1198017 60100765 ~ 60101056 (-)
LOC110524239 LOC106573579 other upstream 2156246 61058949 ~ 61081864 (-)
G424474 NA other upstream 2714122 61616870 ~ 61617244 (-)

Expression


Co-expression Network