G420663


Basic Information

Item Value
gene id G420663
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 58951093 ~ 58951334 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU476728
cttCGCTTTGCGcacggtggcattgtcatgctgaaaaagcaaagggcttccccaaactgttgaaacaaagttggaagcacagaatcatctaaatGTCATCGTATGCTGTaacgttaagattttccttcagtggaactaaggggccaagttcaaaccatgaaaaacagccccagaccagtattcctcctccgccaaactttacagttgtcactgtgcatttgggcaggtagcgttctctagca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU476728 True 242 lncRNA 0.46 1 58951093 58951334

Neighbor

gene id symbol gene type direction distance location
ndufa7 ndufa7 coding upstream 10626 58936825 ~ 58940467 (+)
LOC110524169 LOC106613650 coding upstream 14732 58911909 ~ 58936361 (+)
LOC110522979 NA coding upstream 50939 58888214 ~ 58900154 (+)
LOC110524168 LOC106613649 coding upstream 72681 58863069 ~ 58878412 (+)
LOC110524166 LOC100194687 coding upstream 101665 58842449 ~ 58849428 (+)
LOC110522980 LOC106613653 coding downstream 2479 58953813 ~ 58985589 (+)
LOC110524171 LOC106613654 coding downstream 55999 59007333 ~ 59013082 (+)
LOC110524172 LOC106613655 coding downstream 74671 59026005 ~ 59036303 (+)
LOC110524173 LOC106613656 coding downstream 87053 59038387 ~ 59050166 (+)
fam43a fam43a coding downstream 188103 59139437 ~ 59141452 (+)
G420659 NA non-coding upstream 3416 58947469 ~ 58947677 (+)
G420656 NA non-coding upstream 8453 58941606 ~ 58942640 (+)
G420642 NA non-coding upstream 53985 58896900 ~ 58897108 (+)
G420629 NA non-coding upstream 93228 58857645 ~ 58857865 (+)
G420622 NA non-coding upstream 118453 58832391 ~ 58832640 (+)
G420665 NA non-coding downstream 1168 58952502 ~ 58952877 (+)
G421069 NA non-coding downstream 165152 59116486 ~ 59116704 (+)
G421080 NA non-coding downstream 170970 59122304 ~ 59122532 (+)
G421090 lsg1 non-coding downstream 179851 59131185 ~ 59133005 (+)
G421133 NA non-coding downstream 218699 59170033 ~ 59171379 (+)
G420634 NA other upstream 6876 58942728 ~ 58944217 (+)
G420117 LOC100846954 other upstream 534317 58411240 ~ 58418268 (+)
G419452 NA other upstream 1051445 57884380 ~ 57899648 (+)
LOC110524119 LOC106613607 other upstream 1583756 57352343 ~ 57367627 (+)
LOC100135807 LOC106613594 other upstream 1992928 56943838 ~ 56958165 (+)
LOC110524226 LOC106573564 other downstream 1742923 60694220 ~ 60695905 (+)
G423922 NA other downstream 2770203 61721537 ~ 61722024 (+)
G424079 NA other downstream 3154189 62105523 ~ 62105872 (+)
LOC110524265 LOC106613745 other downstream 3331818 62283054 ~ 62327772 (+)
G425224 NA other downstream 4093756 63045090 ~ 63051530 (+)

Expression


Co-expression Network