G420665


Basic Information

Item Value
gene id G420665
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 58952502 ~ 58952877 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU476730
TGGAAACTTGCCCATTTGTTACACCTCTAAGACTGCAATTACCACCAGTTACATGTTATTACACTGTAACTGAGTTATTACATCTAACTACTTGTTAgttaattacactgtaataaggacCCCTTTAAATTAAATGTTACTGAAAATCCTAACAAATCAGGTAAAGAGCACCATGTGATGCAgaaacatatgtgggaactccttcaagagtgttggaaaagcattccaggtgaagctggttgagagaatgccaagagtgtgcaaagctgtcatcaaagcaaagggtggctactttgaagaatataaaatatattttgatttgtttaacacttttttggttatgacatgattccaagtgttatttcatagttttgat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU476730 True 376 lncRNA 0.35 1 58952502 58952877

Neighbor

gene id symbol gene type direction distance location
ndufa7 ndufa7 coding upstream 12035 58936825 ~ 58940467 (+)
LOC110524169 LOC106613650 coding upstream 16141 58911909 ~ 58936361 (+)
LOC110522979 NA coding upstream 52348 58888214 ~ 58900154 (+)
LOC110524168 LOC106613649 coding upstream 74090 58863069 ~ 58878412 (+)
LOC110524166 LOC100194687 coding upstream 103074 58842449 ~ 58849428 (+)
LOC110522980 LOC106613653 coding downstream 936 58953813 ~ 58985589 (+)
LOC110524171 LOC106613654 coding downstream 54456 59007333 ~ 59013082 (+)
LOC110524172 LOC106613655 coding downstream 73128 59026005 ~ 59036303 (+)
LOC110524173 LOC106613656 coding downstream 85510 59038387 ~ 59050166 (+)
fam43a fam43a coding downstream 186560 59139437 ~ 59141452 (+)
G420663 NA non-coding upstream 1168 58951093 ~ 58951334 (+)
G420659 NA non-coding upstream 4825 58947469 ~ 58947677 (+)
G420656 NA non-coding upstream 9862 58941606 ~ 58942640 (+)
G420642 NA non-coding upstream 55394 58896900 ~ 58897108 (+)
G420629 NA non-coding upstream 94637 58857645 ~ 58857865 (+)
G421069 NA non-coding downstream 163609 59116486 ~ 59116704 (+)
G421080 NA non-coding downstream 169427 59122304 ~ 59122532 (+)
G421090 lsg1 non-coding downstream 178308 59131185 ~ 59133005 (+)
G421133 NA non-coding downstream 217156 59170033 ~ 59171379 (+)
G421188 NA non-coding downstream 280660 59233537 ~ 59237839 (+)
G420634 NA other upstream 8285 58942728 ~ 58944217 (+)
G420117 LOC100846954 other upstream 535726 58411240 ~ 58418268 (+)
G419452 NA other upstream 1052854 57884380 ~ 57899648 (+)
LOC110524119 LOC106613607 other upstream 1585165 57352343 ~ 57367627 (+)
LOC100135807 LOC106613594 other upstream 1994337 56943838 ~ 56958165 (+)
LOC110524226 LOC106573564 other downstream 1741380 60694220 ~ 60695905 (+)
G423922 NA other downstream 2768660 61721537 ~ 61722024 (+)
G424079 NA other downstream 3152646 62105523 ~ 62105872 (+)
LOC110524265 LOC106613745 other downstream 3330275 62283054 ~ 62327772 (+)
G425224 NA other downstream 4092213 63045090 ~ 63051530 (+)

Expression


Co-expression Network