G420982 (LOC106613655)


Basic Information

Item Value
gene id G420982
gene name LOC106613655
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 59026103 ~ 59036299 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU477090
AAATATGGTAATGAGATTTATTGTTCGTCCTCTCAGTTACAACTTTCATTTGAACTAAAAAGAAACACTACCTATGCAGATTTACTTGGATAAGAGGGTtttgactatatatatatatatatatatatatattccacagTAACTTCTTACACCTGTCTGGTATTGGCATCTATAACAGTATTGTAGCAGAGTAAAAGGCATGGCTACAACAATACTGTATTCTTGTATAAATGCCAACAGCCAATTCCACCTTATAAATATAAAATTGATAAGATATCTTATAGATCAGCAATTAACTAAATGGATGAGGATGTGAGTGTAGTCTGCTGAGTGTCATCCAGTGGCATAGCATGAGAGTCAAATTCAGGAGCCACTGGGAACAAAAGATGAGTCACATGGATGAATTCCAATTCCCTTCCTTTTTACTGTAAGTGTGCACTTGTTGACTCCATTGTGTTTAAAAGCACTGGATTTGTGCAAGTATTCCTTACACTCGTCTATTCATTTTAAATCTATGAAAGGGAGTGAACATGTGTGCACTTCAAATCAGAGTTTAGTCGCGTACAGATTacttgtttctagctccagcagtgcagtaaatgccTGTCTGCACTttgggagaaggacagagaactAGAACACAGCTAAACACTTTCAGTATCCTCTTCAGACGGAAACCTGGCTGAAAACGAGCACTAATGTAAGGCATATGCACACGTCTGAAAGTCTATTTAAGTGGCGAAATGAATGTAGATCAAAATGCAGTGAATTTTAAAAACCCTCTTGTGCTAAATGATTGTGCTGTTGAAACAGAAGTGGTGGGCGTTAGGAGACACTTCTTAGCTGCAGCTCCTAAAACACAACTGACGAGATGTGGTGAGCTGTATGCTTTCAATAAATGAGATGGCCTTTCTACATAAACGCTCAAACGTGAAGGTGAGAAAATGGTACGTAAACctgcattacatttttttttggggggggggggggataatttAGATTTACATGAATTTGAGAtttgaaatatttttttgtaGTCTTTTCAAATTTCACTTACAAAAAAGCAATAACAATCTCCATACAATTCAATGTAACCTGAAAGCAGATGCAGGATTCAGACCTAATATTGCATGATACCAGGATTAGCAACAACAGTATTGATTTATTGAGTGGGTGCACCTAATAAGGCCTTGTTAGGATGGGGAACAGGTGCCACAATACACTTTATCATAGGGAAAGGGGTGGTCATTTCCAATGGTGCCCAAAATGGCAGTTCATAACAAGTCAACTGGCTCTGGTCATGATTTTCTTACGTGagttattatcatcatcattggGGGGTTAATGGAGGCGATTACGATAGGCAAGAGTGCAGATCACATACCTGTAGTCTCATTCTCAGAAAGAATTAGATATGTTAGTGTATTGTGAACTGAAATAAATTACTTTAATCCCTTTTCAACATAAGTGCCAAAAACTGACAGTGGGAATAAAATCCATAAACTGCCGAGATGCTTCACAAGTGGACATGCACAGTAAAATAAAATCATCAGGAACATTGGTTGGGAGTTTGCTTTTCCTTGTCAAATCGGAACGAAACAAGCGGAAGTCCCAAGGTGATTCCTTGCATCGGAGGTCCTTCCTAGGGAATGAATGCAGCTTTTCCAgcaacacattcataaatggggGAATAATTATAGGTTGGGGGCATCTTCCATTGTAAGGTCCAATGTGCATAGGTAAACAGTTTTTTTAGCTGCTGCTGGAGTTGGTTCACTTTGTGTTGTAGTTGGCAAAGCGCTGGTTCAGGGGGTTCTCTGGCGACTTCATCCACTCCTTTTTCAGCTGTTGCTTGAGCTGCGACAGCCGCATGTTGGGGTTCTCTTTTTTAAGAAGGGGCATGTTCAGATCCTCGAACGCGGCGAACGCTGCCTTCACCCTGCGCTCTGGGTGGCGGTCGAGCTCTTCAGCCGTGCTGAGCATGGCAATGGCATCCTCTATGGTTCTAGCCTCCACAACACCTTCCTCAGGAATGATGCGATTCACGTTCTCCTCCAGGGGTGTCTCCAGGTGGCTCTTCTCTTTCTCTTTGGGTTGCTCCTGCTGTTGTAGCTGCTGCTCGACATGCAACATCTCCTCAATCTGGGCCCGAGTTACTTTGCCTGccaccacagcagcagcagcagcctccttGGCCTTGCCCTTAATCTTTGCAGCCTCCTCATCTAAGAGCCGCTGGTTCTCCTTCTTTCGCTCCAGGGCCTCAAGGCGCTTTTTCTCCTTGTCATCCTTCCTCTGTTCTTTCTTCAGGACATGTTTGTCGTTCTCCTGCCATAGTGCATCCTCCAGCTCCTTCTTCTTGCGGGCGTCTTCCACTGCTTTGGCCTCTGCCTTGCGGGCCTTGGCAGTGACCGCCTTGGAGTTCTCACCCTGGAACTTCTTCGGCATCCCTAAGACTAGGCCTATTCTTCAGCTGAGCGACAACAGGTTATTGTTGTTTCGAAAAGGCATCTGCCAG

Function

NR:

description
coiled-coil domain-containing protein 124-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU477090 True 2518 TUCP 0.43 5 59026103 59036299

Neighbor

gene id symbol gene type direction distance location
LOC118964628 NA coding downstream 24523 58982688 ~ 59001580 (-)
gamt gamt coding downstream 169656 58852019 ~ 58856447 (-)
LOC110524167 LOC106613995 coding downstream 189992 58834262 ~ 58836111 (-)
LOC110524158 LOC106613645 coding downstream 350175 58671471 ~ 58675928 (-)
LOC110524152 LOC100194657 coding downstream 447492 58573258 ~ 58578611 (-)
atp13a3 LOC106613657 coding upstream 18821 59055120 ~ 59115105 (-)
tmem44 tmem44 coding upstream 88782 59125081 ~ 59131011 (-)
lsg1 lsg1 coding upstream 94853 59131152 ~ 59138429 (-)
LOC110524182 LOC106613664 coding upstream 323587 59359886 ~ 59448197 (-)
LOC110524184 LOC106613666 coding upstream 432481 59468780 ~ 59563676 (-)
G420992 NA non-coding downstream 76110 58949757 ~ 58949993 (-)
G420968 NA non-coding downstream 118759 58907063 ~ 58907344 (-)
G420964 NA non-coding downstream 123355 58899153 ~ 58902748 (-)
G420963 NA non-coding downstream 127218 58898437 ~ 58898885 (-)
G420956 NA non-coding downstream 143396 58882494 ~ 58882707 (-)
G421034 NA non-coding upstream 9071 59045370 ~ 59045647 (-)
G420981 NA non-coding upstream 11406 59047705 ~ 59053737 (-)
G421077 NA non-coding upstream 84761 59121060 ~ 59121285 (-)
G421079 NA non-coding upstream 85450 59121749 ~ 59122035 (-)
G421137 NA non-coding upstream 130074 59166373 ~ 59166782 (-)
G420421 NA other downstream 611960 58413128 ~ 58414143 (-)
G420193 NA other downstream 912043 58112387 ~ 58114060 (-)
G419714 NA other downstream 1320167 57699745 ~ 57705936 (-)
LOC110524128 LOC107602773 other downstream 1399929 57612040 ~ 57627128 (-)
G419603 NA other downstream 1414536 57611059 ~ 57611567 (-)
G422347 NA other upstream 1064466 60100765 ~ 60101056 (-)
LOC110524239 LOC106573579 other upstream 2022695 61058949 ~ 61081864 (-)
G424474 NA other upstream 2580571 61616870 ~ 61617244 (-)
G424499 LOC106613729 other upstream 2613668 61649967 ~ 61651775 (-)

Expression


Co-expression Network