G421079



Basic Information


Item Value
gene id G421079
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 59121749 ~ 59122035 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU477193
gcagagaaaccactactaaagggtaacaataagaagaagagacttgcttgggacaagaaacatgagcaatggacattagaccggtggaaatctgtcctttggtctgatgggtccaaatgtttgatttttggttccaaccaccgtgtctttgtgagacgcagagtaagtgaacggattatctctgcatgtgtggttcccaccgtgaagcatggaggagtgatggtgtgggggtacttgctggtgacactcagtgatttattttagatttcaaggcacacttaaccagc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU477193 True 287 lncRNA 0.45 1 59121749 59122035

Neighbor


gene id symbol gene type direction distance location
atp13a3 LOC106613657 coding downstream 6644 59055120 ~ 59115105 (-)
trnaa-ugc-13 NA coding downstream 95151 59026526 ~ 59026598 (-)
LOC118964628 NA coding downstream 120169 58982688 ~ 59001580 (-)
gamt gamt coding downstream 265302 58852019 ~ 58856447 (-)
LOC110524167 LOC106613995 coding downstream 285638 58834262 ~ 58836111 (-)
tmem44 tmem44 coding upstream 3046 59125081 ~ 59131011 (-)
lsg1 lsg1 coding upstream 9117 59131152 ~ 59138429 (-)
LOC110524182 LOC106613664 coding upstream 237851 59359886 ~ 59448197 (-)
LOC110524184 LOC106613666 coding upstream 346745 59468780 ~ 59563676 (-)
LOC118964629 NA coding upstream 486347 59608382 ~ 59612038 (-)
G421077 NA non-coding downstream 464 59121060 ~ 59121285 (-)
G420981 NA non-coding downstream 68012 59047705 ~ 59053737 (-)
G421034 NA non-coding downstream 76102 59045370 ~ 59045647 (-)
G420992 NA non-coding downstream 171756 58949757 ~ 58949993 (-)
G420968 NA non-coding downstream 214405 58907063 ~ 58907344 (-)
G421137 NA non-coding upstream 44338 59166373 ~ 59166782 (-)
G421138 NA non-coding upstream 44878 59166913 ~ 59169292 (-)
G421141 NA non-coding upstream 50091 59172126 ~ 59172338 (-)
G421144 NA non-coding upstream 51579 59173614 ~ 59173934 (-)
G421935 NA non-coding upstream 228811 59350846 ~ 59352325 (-)
G420982 LOC106613655 other downstream 85450 59026103 ~ 59036299 (-)
G420421 NA other downstream 707606 58413128 ~ 58414143 (-)
G420193 NA other downstream 1007689 58112387 ~ 58114060 (-)
G419714 NA other downstream 1415813 57699745 ~ 57705936 (-)
LOC110524128 LOC107602773 other downstream 1495575 57612040 ~ 57627128 (-)
G422347 NA other upstream 978730 60100765 ~ 60101056 (-)
LOC110524239 LOC106573579 other upstream 1936959 61058949 ~ 61081864 (-)
G424474 NA other upstream 2494835 61616870 ~ 61617244 (-)
G424499 LOC106613729 other upstream 2527932 61649967 ~ 61651775 (-)

Expression



Co-expression Network