G421080


Basic Information

Item Value
gene id G421080
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 59122304 ~ 59122532 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU477194
ttgtgctggggacaataaaaggccacaaaaAATGTGCAGTTGCATCACACAatataatgccacagatgtctcaagttgaggaaatgtgcaattagcatgctgactgcaggaatgtccaccagaactgttgccagaaaatgtgtTGAATTCTCTACCATAGGCCGCttccatgtcattttagagaattttgcagtacgtccaaccggcctcacaaccgcagaccatatgt

Function

NR:

description
hypothetical protein EH28_06569

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU477194 True 229 lncRNA 0.44 1 59122304 59122532

Neighbor

gene id symbol gene type direction distance location
LOC110524173 LOC106613656 coding upstream 72138 59038387 ~ 59050166 (+)
LOC110524172 LOC106613655 coding upstream 86001 59026005 ~ 59036303 (+)
LOC110524171 LOC106613654 coding upstream 109222 59007333 ~ 59013082 (+)
LOC110522980 LOC106613653 coding upstream 136715 58953813 ~ 58985589 (+)
ndufa7 ndufa7 coding upstream 181837 58936825 ~ 58940467 (+)
fam43a fam43a coding downstream 16905 59139437 ~ 59141452 (+)
LOC110524179 NA coding downstream 44721 59167253 ~ 59169330 (+)
srsf11 LOC106613665 coding downstream 228247 59350779 ~ 59358665 (+)
LOC110524183 cgl coding downstream 333832 59456364 ~ 59463907 (+)
LOC110524186 LOC106613996 coding downstream 468528 59591060 ~ 59595336 (+)
G421069 NA non-coding upstream 5600 59116486 ~ 59116704 (+)
G420665 NA non-coding upstream 169427 58952502 ~ 58952877 (+)
G420663 NA non-coding upstream 170970 58951093 ~ 58951334 (+)
G420659 NA non-coding upstream 174627 58947469 ~ 58947677 (+)
G420656 NA non-coding upstream 179664 58941606 ~ 58942640 (+)
G421090 lsg1 non-coding downstream 8653 59131185 ~ 59133005 (+)
G421133 NA non-coding downstream 47501 59170033 ~ 59171379 (+)
G421188 NA non-coding downstream 111005 59233537 ~ 59237839 (+)
G421362 NA non-coding downstream 217519 59340051 ~ 59347531 (+)
G421376 NA non-coding downstream 236550 59359082 ~ 59359566 (+)
G420634 NA other upstream 178087 58942728 ~ 58944217 (+)
G420117 LOC100846954 other upstream 705528 58411240 ~ 58418268 (+)
G419452 NA other upstream 1222656 57884380 ~ 57899648 (+)
LOC110524119 LOC106613607 other upstream 1754967 57352343 ~ 57367627 (+)
LOC100135807 LOC106613594 other upstream 2164139 56943838 ~ 56958165 (+)
LOC110524226 LOC106573564 other downstream 1571725 60694220 ~ 60695905 (+)
G423922 NA other downstream 2599005 61721537 ~ 61722024 (+)
G424079 NA other downstream 2982991 62105523 ~ 62105872 (+)
LOC110524265 LOC106613745 other downstream 3160620 62283054 ~ 62327772 (+)
G425224 NA other downstream 3922558 63045090 ~ 63051530 (+)

Expression


Co-expression Network