G421188


Basic Information

Item Value
gene id G421188
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 59233537 ~ 59237839 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU477313
gtgtataggtggcaaggaagtcaggcgcaggagagtcgaaatagagtgtaaatggagtcttttaataactgtccacagaacatgctccataacactaaatagtatagacatgaaaaaacatgggtacgaggacccgtcgcacaccaatacaacaaataaacaacactgacaataaaacaatctctgacaaagacatgaggggaaacagagggttaaatacacaacagttaatgaatgggattgaaaacaagtgtgtgggaagacaagacaaaaccaatggaaaatgaaaaatggatcaatgatggctagaagaccggtgacgtcgaacgccgagcaccgcccgaacaaggagaggcaacgacttcgg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU477313 True 367 lncRNA 0.43 2 59233537 59237839

Neighbor

gene id symbol gene type direction distance location
LOC110524179 NA coding upstream 64207 59167253 ~ 59169330 (+)
fam43a fam43a coding upstream 92085 59139437 ~ 59141452 (+)
LOC110524173 LOC106613656 coding upstream 183371 59038387 ~ 59050166 (+)
LOC110524172 LOC106613655 coding upstream 197234 59026005 ~ 59036303 (+)
LOC110524171 LOC106613654 coding upstream 220455 59007333 ~ 59013082 (+)
srsf11 LOC106613665 coding downstream 112940 59350779 ~ 59358665 (+)
LOC110524183 cgl coding downstream 218525 59456364 ~ 59463907 (+)
LOC110524186 LOC106613996 coding downstream 353221 59591060 ~ 59595336 (+)
LOC110524187 LOC106613668 coding downstream 405944 59643783 ~ 59661241 (+)
LOC110524190 LOC106613673 coding downstream 476867 59714706 ~ 59734498 (+)
G421133 NA non-coding upstream 62158 59170033 ~ 59171379 (+)
G421090 lsg1 non-coding upstream 100532 59131185 ~ 59133005 (+)
G421080 NA non-coding upstream 111005 59122304 ~ 59122532 (+)
G421069 NA non-coding upstream 116833 59116486 ~ 59116704 (+)
G420665 NA non-coding upstream 280660 58952502 ~ 58952877 (+)
G421362 NA non-coding downstream 102212 59340051 ~ 59347531 (+)
G421376 NA non-coding downstream 121243 59359082 ~ 59359566 (+)
G421372 NA non-coding downstream 122077 59359916 ~ 59361000 (+)
G421517 NA non-coding downstream 426885 59664724 ~ 59665892 (+)
G421614 LOC106613672 non-coding downstream 472778 59710617 ~ 59712799 (+)
G420634 NA other upstream 289320 58942728 ~ 58944217 (+)
G420117 LOC100846954 other upstream 816761 58411240 ~ 58418268 (+)
G419452 NA other upstream 1333889 57884380 ~ 57899648 (+)
LOC110524119 LOC106613607 other upstream 1866200 57352343 ~ 57367627 (+)
LOC100135807 LOC106613594 other upstream 2275372 56943838 ~ 56958165 (+)
LOC110524226 LOC106573564 other downstream 1456418 60694220 ~ 60695905 (+)
G423922 NA other downstream 2483698 61721537 ~ 61722024 (+)
G424079 NA other downstream 2867684 62105523 ~ 62105872 (+)
LOC110524265 LOC106613745 other downstream 3045313 62283054 ~ 62327772 (+)
G425224 NA other downstream 3807251 63045090 ~ 63051530 (+)

Expression


Co-expression Network