Gene
RNA
| Item | Value |
|---|---|
| gene id | G421372 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 59359916 ~ 59361000 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| ankyrin repeat domain-containing protein 13C-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU477505 | True | 995 | lncRNA | 0.43 | 3 | 59359916 | 59361000 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| srsf11 | LOC106613665 | coding | upstream | 1251 | 59350779 ~ 59358665 (+) |
| LOC110524179 | NA | coding | upstream | 190586 | 59167253 ~ 59169330 (+) |
| fam43a | fam43a | coding | upstream | 218464 | 59139437 ~ 59141452 (+) |
| LOC110524173 | LOC106613656 | coding | upstream | 309750 | 59038387 ~ 59050166 (+) |
| LOC110524172 | LOC106613655 | coding | upstream | 323613 | 59026005 ~ 59036303 (+) |
| LOC110524183 | cgl | coding | downstream | 95364 | 59456364 ~ 59463907 (+) |
| LOC110524186 | LOC106613996 | coding | downstream | 230060 | 59591060 ~ 59595336 (+) |
| LOC110524187 | LOC106613668 | coding | downstream | 282783 | 59643783 ~ 59661241 (+) |
| LOC110524190 | LOC106613673 | coding | downstream | 353706 | 59714706 ~ 59734498 (+) |
| LOC110524191 | LOC106613674 | coding | downstream | 380216 | 59741216 ~ 59744639 (+) |
| G421376 | NA | non-coding | upstream | 350 | 59359082 ~ 59359566 (+) |
| G421362 | NA | non-coding | upstream | 12385 | 59340051 ~ 59347531 (+) |
| G421188 | NA | non-coding | upstream | 122077 | 59233537 ~ 59237839 (+) |
| G421133 | NA | non-coding | upstream | 188537 | 59170033 ~ 59171379 (+) |
| G421090 | lsg1 | non-coding | upstream | 226911 | 59131185 ~ 59133005 (+) |
| G421517 | NA | non-coding | downstream | 303724 | 59664724 ~ 59665892 (+) |
| G421614 | LOC106613672 | non-coding | downstream | 349617 | 59710617 ~ 59712799 (+) |
| G421616 | NA | non-coding | downstream | 357025 | 59718025 ~ 59718250 (+) |
| G421627 | NA | non-coding | downstream | 378819 | 59739819 ~ 59740031 (+) |
| G420634 | NA | other | upstream | 415699 | 58942728 ~ 58944217 (+) |
| G420117 | LOC100846954 | other | upstream | 943140 | 58411240 ~ 58418268 (+) |
| G419452 | NA | other | upstream | 1460268 | 57884380 ~ 57899648 (+) |
| LOC110524119 | LOC106613607 | other | upstream | 1992579 | 57352343 ~ 57367627 (+) |
| LOC100135807 | LOC106613594 | other | upstream | 2401751 | 56943838 ~ 56958165 (+) |
| LOC110524226 | LOC106573564 | other | downstream | 1333257 | 60694220 ~ 60695905 (+) |
| G423922 | NA | other | downstream | 2360537 | 61721537 ~ 61722024 (+) |
| G424079 | NA | other | downstream | 2744523 | 62105523 ~ 62105872 (+) |
| LOC110524265 | LOC106613745 | other | downstream | 2922152 | 62283054 ~ 62327772 (+) |
| G425224 | NA | other | downstream | 3684090 | 63045090 ~ 63051530 (+) |
