Gene
RNA
| Item | Value |
|---|---|
| gene id | G421948 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 59370649 ~ 59371499 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU478146 | False | 320 | lncRNA | 0.40 | 2 | 59370649 | 59371499 |
| TU478145 | True | 212 | lncRNA | 0.58 | 2 | 59370980 | 59371499 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| lsg1 | lsg1 | coding | downstream | 232220 | 59131152 ~ 59138429 (-) |
| tmem44 | tmem44 | coding | downstream | 239638 | 59125081 ~ 59131011 (-) |
| atp13a3 | LOC106613657 | coding | downstream | 255544 | 59055120 ~ 59115105 (-) |
| trnaa-ugc-13 | NA | coding | downstream | 344051 | 59026526 ~ 59026598 (-) |
| LOC118964628 | NA | coding | downstream | 369069 | 58982688 ~ 59001580 (-) |
| LOC110524184 | LOC106613666 | coding | upstream | 97281 | 59468780 ~ 59563676 (-) |
| LOC118964629 | NA | coding | upstream | 236883 | 59608382 ~ 59612038 (-) |
| LOC110524188 | LOC106613669 | coding | upstream | 294416 | 59665915 ~ 59709692 (-) |
| cope | LOC106613672 | coding | upstream | 339116 | 59710615 ~ 59714101 (-) |
| LOC110524192 | LOC106613675 | coding | upstream | 373977 | 59745476 ~ 59754819 (-) |
| G421940 | NA | non-coding | downstream | 10960 | 59359109 ~ 59359689 (-) |
| G421935 | NA | non-coding | downstream | 18324 | 59350846 ~ 59352325 (-) |
| G421144 | NA | non-coding | downstream | 196715 | 59173614 ~ 59173934 (-) |
| G421141 | NA | non-coding | downstream | 198311 | 59172126 ~ 59172338 (-) |
| G421138 | NA | non-coding | downstream | 201357 | 59166913 ~ 59169292 (-) |
| G421950 | NA | non-coding | upstream | 820 | 59372319 ~ 59372754 (-) |
| G421951 | NA | non-coding | upstream | 1486 | 59372985 ~ 59373605 (-) |
| G422088 | NA | non-coding | upstream | 291822 | 59663321 ~ 59664610 (-) |
| G422089 | NA | non-coding | upstream | 293219 | 59664718 ~ 59665888 (-) |
| G422125 | LOC106613673 | non-coding | upstream | 347210 | 59718709 ~ 59734459 (-) |
| G420982 | LOC106613655 | other | downstream | 334350 | 59026103 ~ 59036299 (-) |
| G420421 | NA | other | downstream | 956506 | 58413128 ~ 58414143 (-) |
| G420193 | NA | other | downstream | 1256589 | 58112387 ~ 58114060 (-) |
| G419714 | NA | other | downstream | 1664713 | 57699745 ~ 57705936 (-) |
| G422347 | NA | other | upstream | 729266 | 60100765 ~ 60101056 (-) |
| LOC110524239 | LOC106573579 | other | upstream | 1687495 | 61058949 ~ 61081864 (-) |
| G424474 | NA | other | upstream | 2245371 | 61616870 ~ 61617244 (-) |
| G424499 | LOC106613729 | other | upstream | 2278468 | 61649967 ~ 61651775 (-) |
| G424502 | NA | other | upstream | 2287534 | 61659033 ~ 61659585 (-) |
