G421950



Basic Information


Item Value
gene id G421950
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 59372319 ~ 59372754 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU478148
gtaggttagacagagctggtgagtgcaggtagagtAAACAGAGCTGGTGAGTGCAGTTAGGGTGGACAGAGCTGGTGACTGCATGTAGGTTAGACAGCcctggtgagtgcaggtagggtagacagccctggtgagtgcaggtagggtagacagagctggtgagtgcaggtagggtagacagagcaggtgagtgaaggtagggtagatagagc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU478148 True 212 lncRNA 0.55 2 59372319 59372754

Neighbor


gene id symbol gene type direction distance location
lsg1 lsg1 coding downstream 233890 59131152 ~ 59138429 (-)
tmem44 tmem44 coding downstream 241308 59125081 ~ 59131011 (-)
atp13a3 LOC106613657 coding downstream 257214 59055120 ~ 59115105 (-)
trnaa-ugc-13 NA coding downstream 345721 59026526 ~ 59026598 (-)
LOC118964628 NA coding downstream 370739 58982688 ~ 59001580 (-)
LOC110524184 LOC106613666 coding upstream 96026 59468780 ~ 59563676 (-)
LOC118964629 NA coding upstream 235628 59608382 ~ 59612038 (-)
LOC110524188 LOC106613669 coding upstream 293161 59665915 ~ 59709692 (-)
cope LOC106613672 coding upstream 337861 59710615 ~ 59714101 (-)
LOC110524192 LOC106613675 coding upstream 372722 59745476 ~ 59754819 (-)
G421948 NA non-coding downstream 820 59370649 ~ 59371499 (-)
G421940 NA non-coding downstream 12630 59359109 ~ 59359689 (-)
G421935 NA non-coding downstream 19994 59350846 ~ 59352325 (-)
G421144 NA non-coding downstream 198385 59173614 ~ 59173934 (-)
G421141 NA non-coding downstream 199981 59172126 ~ 59172338 (-)
G421951 NA non-coding upstream 231 59372985 ~ 59373605 (-)
G422088 NA non-coding upstream 290567 59663321 ~ 59664610 (-)
G422089 NA non-coding upstream 291964 59664718 ~ 59665888 (-)
G422125 LOC106613673 non-coding upstream 345955 59718709 ~ 59734459 (-)
G422138 NA non-coding upstream 367528 59740282 ~ 59740548 (-)
G420982 LOC106613655 other downstream 336020 59026103 ~ 59036299 (-)
G420421 NA other downstream 958176 58413128 ~ 58414143 (-)
G420193 NA other downstream 1258259 58112387 ~ 58114060 (-)
G419714 NA other downstream 1666383 57699745 ~ 57705936 (-)
G422347 NA other upstream 728011 60100765 ~ 60101056 (-)
LOC110524239 LOC106573579 other upstream 1686240 61058949 ~ 61081864 (-)
G424474 NA other upstream 2244116 61616870 ~ 61617244 (-)
G424499 LOC106613729 other upstream 2277213 61649967 ~ 61651775 (-)
G424502 NA other upstream 2286279 61659033 ~ 61659585 (-)

Expression



Co-expression Network