G421951


Basic Information

Item Value
gene id G421951
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 59372985 ~ 59373605 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU478149
ggtgagtgcaggtagggtagacagccctggtgagtgcaggtagggtagacagagctggtgagtgcaggtagggtagacagcccTGGTGAGTGCAGATAGGATAGACAGAgatggtgagtgcaggtagggtagacagccctggtgagtgcaggtagggtagacagagctggtgagtgcaggtagggtagacagagctggtgagtgcaggtagggtaaaCAGAGCTGGTGAGTGCAGTTAGGGTGGACAGAGCTGGTGACTGCACATAGGGTAGACAGCcctggtgagtgcaggtagggtagacagccctggtgagtgcaggtagggtagacagccctggtgagtgcaggtagtgtagacagagctggtga
>TU478150
cgacagagctggtgagtgcaggtagggtagacagagctggtgagtgcaggtagggtataCAGAGCTGGTTAGTGCAGgtagggtagacagcccTGGTGAGTGCAGATAGGATAGACAGAgatggtgagtgcaggtagggtagacagccctggtgagtgcaggtagggtagacagagctggtgagtgcaggtagggtagacagagctggtgagtgcaggtagggtaaaCAGAGCTGGTGAGTGCAGTTAGGGTGGACAGAGCTGGTGACTGCACATAGGGTAGACAGCcctggtgagtgcaggtagggtagacagccctggtgagtgcaggtagggtagacagccctggtgagtgcaggtagtgtagacagagctggtga

Function

NR:

description
PREDICTED: mucin-2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU478149 False 369 lncRNA 0.57 2 59372985 59373605
TU478150 True 379 lncRNA 0.56 2 59372985 59373391

Neighbor

gene id symbol gene type direction distance location
lsg1 lsg1 coding downstream 234556 59131152 ~ 59138429 (-)
tmem44 tmem44 coding downstream 241974 59125081 ~ 59131011 (-)
atp13a3 LOC106613657 coding downstream 257880 59055120 ~ 59115105 (-)
trnaa-ugc-13 NA coding downstream 346387 59026526 ~ 59026598 (-)
LOC118964628 NA coding downstream 371405 58982688 ~ 59001580 (-)
LOC110524184 LOC106613666 coding upstream 95175 59468780 ~ 59563676 (-)
LOC118964629 NA coding upstream 234777 59608382 ~ 59612038 (-)
LOC110524188 LOC106613669 coding upstream 292310 59665915 ~ 59709692 (-)
cope LOC106613672 coding upstream 337010 59710615 ~ 59714101 (-)
LOC110524192 LOC106613675 coding upstream 371871 59745476 ~ 59754819 (-)
G421950 NA non-coding downstream 231 59372319 ~ 59372754 (-)
G421948 NA non-coding downstream 1486 59370649 ~ 59371499 (-)
G421940 NA non-coding downstream 13296 59359109 ~ 59359689 (-)
G421935 NA non-coding downstream 20660 59350846 ~ 59352325 (-)
G421144 NA non-coding downstream 199051 59173614 ~ 59173934 (-)
G422088 NA non-coding upstream 289716 59663321 ~ 59664610 (-)
G422089 NA non-coding upstream 291113 59664718 ~ 59665888 (-)
G422125 LOC106613673 non-coding upstream 345104 59718709 ~ 59734459 (-)
G422138 NA non-coding upstream 366677 59740282 ~ 59740548 (-)
G422139 LOC106613674 non-coding upstream 367799 59741404 ~ 59741629 (-)
G420982 LOC106613655 other downstream 336686 59026103 ~ 59036299 (-)
G420421 NA other downstream 958842 58413128 ~ 58414143 (-)
G420193 NA other downstream 1258925 58112387 ~ 58114060 (-)
G419714 NA other downstream 1667049 57699745 ~ 57705936 (-)
G422347 NA other upstream 727160 60100765 ~ 60101056 (-)
LOC110524239 LOC106573579 other upstream 1685389 61058949 ~ 61081864 (-)
G424474 NA other upstream 2243265 61616870 ~ 61617244 (-)
G424499 LOC106613729 other upstream 2276362 61649967 ~ 61651775 (-)
G424502 NA other upstream 2285428 61659033 ~ 61659585 (-)

Expression


Co-expression Network