Gene
RNA
| Item | Value |
|---|---|
| gene id | G421616 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 59718025 ~ 59718250 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU477769 | True | 226 | lncRNA | 0.34 | 1 | 59718025 | 59718250 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524187 | LOC106613668 | coding | upstream | 56784 | 59643783 ~ 59661241 (+) |
| LOC110524186 | LOC106613996 | coding | upstream | 122689 | 59591060 ~ 59595336 (+) |
| LOC110524183 | cgl | coding | upstream | 254118 | 59456364 ~ 59463907 (+) |
| srsf11 | LOC106613665 | coding | upstream | 359360 | 59350779 ~ 59358665 (+) |
| LOC110524179 | NA | coding | upstream | 548695 | 59167253 ~ 59169330 (+) |
| LOC110524191 | LOC106613674 | coding | downstream | 22966 | 59741216 ~ 59744639 (+) |
| LOC110524195 | LOC106613677 | coding | downstream | 83778 | 59802028 ~ 59821970 (+) |
| LOC110524196 | LOC106613678 | coding | downstream | 108825 | 59827075 ~ 59838227 (+) |
| LOC110524197 | LOC106613680 | coding | downstream | 151440 | 59869690 ~ 59880569 (+) |
| LOC110524198 | LOC106613681 | coding | downstream | 171369 | 59889619 ~ 59904034 (+) |
| G421614 | LOC106613672 | non-coding | upstream | 5226 | 59710617 ~ 59712799 (+) |
| G421517 | NA | non-coding | upstream | 52133 | 59664724 ~ 59665892 (+) |
| G421372 | NA | non-coding | upstream | 357025 | 59359916 ~ 59361000 (+) |
| G421376 | NA | non-coding | upstream | 358459 | 59359082 ~ 59359566 (+) |
| G421362 | NA | non-coding | upstream | 370494 | 59340051 ~ 59347531 (+) |
| LOC110524190 | LOC106613673 | non-coding | downstream | 14687 | 59714706 ~ 59734498 (+) |
| G421627 | NA | non-coding | downstream | 21569 | 59739819 ~ 59740031 (+) |
| G421574 | NA | non-coding | downstream | 26516 | 59744766 ~ 59745075 (+) |
| G421570 | NA | non-coding | downstream | 43667 | 59761917 ~ 59762428 (+) |
| G420634 | NA | other | upstream | 773808 | 58942728 ~ 58944217 (+) |
| G420117 | LOC100846954 | other | upstream | 1301249 | 58411240 ~ 58418268 (+) |
| G419452 | NA | other | upstream | 1818377 | 57884380 ~ 57899648 (+) |
| LOC110524119 | LOC106613607 | other | upstream | 2350688 | 57352343 ~ 57367627 (+) |
| LOC100135807 | LOC106613594 | other | upstream | 2759860 | 56943838 ~ 56958165 (+) |
| LOC110524226 | LOC106573564 | other | downstream | 976007 | 60694220 ~ 60695905 (+) |
| G423922 | NA | other | downstream | 2003287 | 61721537 ~ 61722024 (+) |
| G424079 | NA | other | downstream | 2387273 | 62105523 ~ 62105872 (+) |
| LOC110524265 | LOC106613745 | other | downstream | 2564902 | 62283054 ~ 62327772 (+) |
| G425224 | NA | other | downstream | 3326840 | 63045090 ~ 63051530 (+) |
