Gene
RNA
| Item | Value |
|---|---|
| gene id | G422157 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 59762173 ~ 59762438 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: zinc finger BED domain-containing protein 4-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU478373 | True | 266 | lncRNA | 0.39 | 1 | 59762173 | 59762438 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524192 | LOC106613675 | coding | downstream | 7354 | 59745476 ~ 59754819 (-) |
| cope | LOC106613672 | coding | downstream | 48072 | 59710615 ~ 59714101 (-) |
| LOC110524188 | LOC106613669 | coding | downstream | 52481 | 59665915 ~ 59709692 (-) |
| LOC118964629 | NA | coding | downstream | 150135 | 59608382 ~ 59612038 (-) |
| LOC110524184 | LOC106613666 | coding | downstream | 198497 | 59468780 ~ 59563676 (-) |
| LOC110524193 | LOC106613676 | coding | upstream | 10323 | 59772761 ~ 59776656 (-) |
| LOC110524194 | LOC106613679 | coding | upstream | 25306 | 59787744 ~ 59801204 (-) |
| LOC118964630 | NA | coding | upstream | 142407 | 59904845 ~ 59914276 (-) |
| klf2a | LOC106613686 | coding | upstream | 216569 | 59979007 ~ 59981619 (-) |
| LOC110524206 | ap1m1 | coding | upstream | 354092 | 60116530 ~ 60134272 (-) |
| G422155 | NA | non-coding | downstream | 1014 | 59760950 ~ 59761159 (-) |
| G422139 | LOC106613674 | non-coding | downstream | 20544 | 59741404 ~ 59741629 (-) |
| G422138 | NA | non-coding | downstream | 21625 | 59740282 ~ 59740548 (-) |
| G422125 | LOC106613673 | non-coding | downstream | 27714 | 59718709 ~ 59734459 (-) |
| G422089 | NA | non-coding | downstream | 96285 | 59664718 ~ 59665888 (-) |
| G422191 | NA | non-coding | upstream | 60985 | 59823423 ~ 59823649 (-) |
| G422194 | NA | non-coding | upstream | 62267 | 59824705 ~ 59825043 (-) |
| G422200 | NA | non-coding | upstream | 79473 | 59841911 ~ 59842034 (-) |
| G422205 | NA | non-coding | upstream | 81622 | 59844060 ~ 59844263 (-) |
| G422206 | NA | non-coding | upstream | 83553 | 59845991 ~ 59846213 (-) |
| lsg1 | lsg1 | other | downstream | 623916 | 59131152 ~ 59138429 (-) |
| G420982 | LOC106613655 | other | downstream | 725874 | 59026103 ~ 59036299 (-) |
| G420421 | NA | other | downstream | 1348030 | 58413128 ~ 58414143 (-) |
| G420193 | NA | other | downstream | 1648113 | 58112387 ~ 58114060 (-) |
| G419714 | NA | other | downstream | 2056237 | 57699745 ~ 57705936 (-) |
| G422347 | NA | other | upstream | 338327 | 60100765 ~ 60101056 (-) |
| LOC110524239 | LOC106573579 | other | upstream | 1296556 | 61058949 ~ 61081864 (-) |
| G424474 | NA | other | upstream | 1854432 | 61616870 ~ 61617244 (-) |
| G424499 | LOC106613729 | other | upstream | 1887529 | 61649967 ~ 61651775 (-) |
| G424502 | NA | other | upstream | 1896595 | 61659033 ~ 61659585 (-) |
