G422200



Basic Information


Item Value
gene id G422200
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 59841911 ~ 59842034 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU478419
acgacagcccgtttggagtttgccaaaaggcacttaaagactattagaccatgagaaacaagactctctggtctgatataaccaagactgaactctttggcctgaatgccaagcttcacatctg

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU478419 True 124 lncRNA 0.44 1 59841911 59842034

Neighbor


gene id symbol gene type direction distance location
LOC110524194 LOC106613679 coding downstream 40707 59787744 ~ 59801204 (-)
LOC110524193 LOC106613676 coding downstream 65255 59772761 ~ 59776656 (-)
LOC110524192 LOC106613675 coding downstream 87092 59745476 ~ 59754819 (-)
cope LOC106613672 coding downstream 127810 59710615 ~ 59714101 (-)
LOC110524188 LOC106613669 coding downstream 132219 59665915 ~ 59709692 (-)
LOC118964630 NA coding upstream 62811 59904845 ~ 59914276 (-)
klf2a LOC106613686 coding upstream 136973 59979007 ~ 59981619 (-)
LOC110524206 ap1m1 coding upstream 274496 60116530 ~ 60134272 (-)
LOC110524209 LOC106613694 coding upstream 440340 60282374 ~ 60289431 (-)
lpl lpl coding upstream 456170 60298204 ~ 60306640 (-)
G422194 NA non-coding downstream 16868 59824705 ~ 59825043 (-)
G422191 NA non-coding downstream 18262 59823423 ~ 59823649 (-)
G422157 NA non-coding downstream 79473 59762173 ~ 59762438 (-)
G422155 NA non-coding downstream 80752 59760950 ~ 59761159 (-)
G422139 LOC106613674 non-coding downstream 100282 59741404 ~ 59741629 (-)
G422205 NA non-coding upstream 2026 59844060 ~ 59844263 (-)
G422206 NA non-coding upstream 3957 59845991 ~ 59846213 (-)
G422207 NA non-coding upstream 6664 59848698 ~ 59919451 (-)
G422208 calr3 non-coding upstream 73595 59915629 ~ 59917890 (-)
lsg1 lsg1 other downstream 703654 59131152 ~ 59138429 (-)
G420982 LOC106613655 other downstream 805612 59026103 ~ 59036299 (-)
G420421 NA other downstream 1427768 58413128 ~ 58414143 (-)
G420193 NA other downstream 1727851 58112387 ~ 58114060 (-)
G419714 NA other downstream 2135975 57699745 ~ 57705936 (-)
G422347 NA other upstream 258731 60100765 ~ 60101056 (-)
LOC110524239 LOC106573579 other upstream 1216960 61058949 ~ 61081864 (-)
G424474 NA other upstream 1774836 61616870 ~ 61617244 (-)
G424499 LOC106613729 other upstream 1807933 61649967 ~ 61651775 (-)
G424502 NA other upstream 1816999 61659033 ~ 61659585 (-)

Expression



Co-expression Network