Gene
RNA
| Item | Value |
|---|---|
| gene id | G422206 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 59845991 ~ 59846213 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU478425 | True | 223 | lncRNA | 0.40 | 1 | 59845991 | 59846213 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524194 | LOC106613679 | coding | downstream | 44787 | 59787744 ~ 59801204 (-) |
| LOC110524193 | LOC106613676 | coding | downstream | 69335 | 59772761 ~ 59776656 (-) |
| LOC110524192 | LOC106613675 | coding | downstream | 91172 | 59745476 ~ 59754819 (-) |
| cope | LOC106613672 | coding | downstream | 131890 | 59710615 ~ 59714101 (-) |
| LOC110524188 | LOC106613669 | coding | downstream | 136299 | 59665915 ~ 59709692 (-) |
| LOC118964630 | NA | coding | upstream | 58632 | 59904845 ~ 59914276 (-) |
| klf2a | LOC106613686 | coding | upstream | 132794 | 59979007 ~ 59981619 (-) |
| LOC110524206 | ap1m1 | coding | upstream | 270317 | 60116530 ~ 60134272 (-) |
| LOC110524209 | LOC106613694 | coding | upstream | 436161 | 60282374 ~ 60289431 (-) |
| lpl | lpl | coding | upstream | 451991 | 60298204 ~ 60306640 (-) |
| G422205 | NA | non-coding | downstream | 1728 | 59844060 ~ 59844263 (-) |
| G422200 | NA | non-coding | downstream | 3957 | 59841911 ~ 59842034 (-) |
| G422194 | NA | non-coding | downstream | 20948 | 59824705 ~ 59825043 (-) |
| G422191 | NA | non-coding | downstream | 22342 | 59823423 ~ 59823649 (-) |
| G422157 | NA | non-coding | downstream | 83553 | 59762173 ~ 59762438 (-) |
| G422207 | NA | non-coding | upstream | 2485 | 59848698 ~ 59919451 (-) |
| G422208 | calr3 | non-coding | upstream | 69416 | 59915629 ~ 59917890 (-) |
| G422254 | NA | non-coding | upstream | 75973 | 59922186 ~ 59922634 (-) |
| G422255 | NA | non-coding | upstream | 81822 | 59928035 ~ 59930514 (-) |
| lsg1 | lsg1 | other | downstream | 707734 | 59131152 ~ 59138429 (-) |
| G420982 | LOC106613655 | other | downstream | 809692 | 59026103 ~ 59036299 (-) |
| G420421 | NA | other | downstream | 1431848 | 58413128 ~ 58414143 (-) |
| G420193 | NA | other | downstream | 1731931 | 58112387 ~ 58114060 (-) |
| G419714 | NA | other | downstream | 2140055 | 57699745 ~ 57705936 (-) |
| G422347 | NA | other | upstream | 254552 | 60100765 ~ 60101056 (-) |
| LOC110524239 | LOC106573579 | other | upstream | 1212781 | 61058949 ~ 61081864 (-) |
| G424474 | NA | other | upstream | 1770657 | 61616870 ~ 61617244 (-) |
| G424499 | LOC106613729 | other | upstream | 1803754 | 61649967 ~ 61651775 (-) |
| G424502 | NA | other | upstream | 1812820 | 61659033 ~ 61659585 (-) |
