G422255


Basic Information

Item Value
gene id G422255
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 59928035 ~ 59930514 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU478484
CGCTGAAATAATAACCTTAAATAAACCTTCAAGTGGTGCATTTAAGTCTAAAACCCTTTTGCTTTATTGTAGTTTCAAagaaaacaaaagaaaacaaaaaaactaaaagtTAGATGCTGAAATCATCACTCCTGTGGTTCCACAGCATGCCATAGCTCAGCTAGAGCCTCTGTTATAAACTCATGCAATTAACCAACCCTACATATCTCAGAGCAACAGTCTTCACATTAAAGTGCTTCCTTTTGCAAAAGCAGAAATCAACTCCATGTACAGTCAGAAACTCTGCTGGGTCAATCTTTCCCATCTACACACAAGAGAAAAATAAAAAGCCAAGGCCAGTTTTGTGGGATGTTTACTTGTTTTCTTTTGGCTTATAGGACGTCCAGAACTTACCTTCACTCTAGCACCTTTTATGAGATGGGTGTTTACTGTTGATAGGCAACATAAATCCTATAGCACTCATCTATGCAAAAACAAAAATACATATTGACTAACGATAGACCTTTGAAAGCTGTACATGACTTTGCACAAACAAACAATTACTCTTCAACAAAATGAGACAAACCACGAGGCATGAAGGAGCAATTACATGGTTAAAAAAACTTGCAGCATGATTTCTTTTGATATAATACATTAAGGATCAGGGgcaatcaaaacacacacacaaaaaaagtgtcCAGAGAGAGCAGAATCTTGTTATATACTTAAAGTGATTATAAAATAATATTAAGGACATGGCTCAATTGACTTTCAGCTTTAACTAACCTTCAACTGTTGAGCAATGATATcgaagaaaaaacaacaactatgTGGCTAAAACTTCCTTTTGTAAAATCATTTGGTACCTTGAAACTACACATCTGGAACCAAATCCAAATATTCCCTACCATCTACCATGTCTCATTTTACAGTGTAATAATATTTGAATACGATGACACATCAATCACAGAACATCCTTCTCTTCTACAAAGAAATGTTTCCTTTGTAACAGTCAAATAAAGTGACAAAGCAACTCTCCAACATTAATAGGACACTTCACGGGCAAAACATCCCAGTTCCCTTTGTCTGACGAAGACAAACATATTGGAAAGGTTGGACAGTAATGATCAGCTGAGAGAAATAAGAAGCTTCTGCATATGTGCGGAATTCTCTTCTTTACGTACAGTCTCCGCTCTACTCATAGAGAACAGGCTGCTCTGCTCTGGTGAACGGGGCTTTATTACTAcagttagatcaaagctgaatcaatgtctgcaACATCACATAATGATAGTGTTCAACATAACAGGGCCAAATATAATAGCATAGTATAACGTTACTGTAAGACAAGACAAAAAACACCTAATTCCGTATGAGATTTTAAGATGATTGTGTGAAGGGTCGGATTTTTCTCTCATGTGGCCAAAACACAAGTGTGCTCCACTTGGCATTATATTTGCTTTGATTGAAACTAAGTACCGTCTGCTCTAAAAGTCAATCACTGTACATAATTCTAAACAACACGGTATAAGAAGATCTAAATGCatatccccatgaaactgattgagatcacAAGGTTGGTATGCAGATTCTGCATGGGCATTTCACCGGTAAAAATGAAAGAATTATCATTCACGATGGACAGTGAGAaatgtgaagggggggggggttctgtatTAAAAGAGCAGAGActgtgagtagagtagagaatcACACACATGCGCAGAAGCTTCGGGACCTTTAGCTGTCAGAACGGAGGGTCGAGAAATGTCGGATTCGCAGCCTCGGCCTAGAAAACAAACAACACATTTGAGATCCGTGGCCATTTTGCTGGTTTTGTCATTTTATCACAGGACACTCAAGTATATTTTCCCAGGAGATGAGGCTCACATTACAAATATGAATCAACCAGCTAATGTATGCTTGGCGTTTTATTTGCGAGGGGTTGAAAAGCAATATATGGTGAGGGCAAGCTGCCCACTGTAACTCTATAGATGGATACGGCACAAGGagcagtaatagcagcagtgagagagagagagagagagagagagagagagagagagagagagagagagagagggagagagagagagagagaccacggaGATCTAACACTCAGAATGGAGAAGGCCTAGCTGACAGTAACAACACATCACGTCTTTGTCCAATGAAAAGCATCCGGGAAGACCAGTCACTTTGGGTAACTTTTTCCACTCCTTCCTTCAAAAGCACATTCTGGAGCACTATTACTCATTCTCTAGCCCTCCATTCTTCCCCTTCATGCCAAGGCAGGCACGTTCACTCGTCATCAAATGTTTGTTGGAGCAGAAAATTGGCAGCTAGATTCTCGTTCTTCTCACATGCAAAATATGCTTGAATGACAAGTCCCTCTGGAAATCCCA
>TU478485
CGCTGAAATAATAACCTTAAATAAACCTTCAAGTGGTGCATTTAAGTCTAAAACCCTTTTGCTTTATTGTAGTTTCAAagaaaacaaaagaaaacaaaaaaactaaaagtTAGATGCTGAAATCATCACTCCTGTGGTTCCACAGCATGCCATAGCTCAGCTAGAGCCTCTGTTATAAACTCATGCAATTAACCAACCCTACATATCTCAGAGCAACAGTCTTCACATTAAAGTGCTTCCTTTTGCAAAAGCAGAAATCAACTCCATGTACAGTCAGAAACTCTGCTGGGTCAATCTTTCCCATCTACACACAAGAGAAAAATAAAAAGCCAAGGCCAGTTTTGTGGGATGTTTACTTGTTTTCTTTTGGCTTATAGGACGTCCAGAACTTACCTTCACTCTAGCACCTTTTATGAGATGGGTGTTTACTGTTGATAGGCAACATAAATCCTATAGCACTCATCTATGCAAAAACAAAAATACATATTGACTAACGATAGACCTTTGAAAGCTGTACATGACTTTGCACAAACAAACAATTACTCTTCAACAAAATGAGACAAACCACGAGGCATGAAGGAGCAATTACATGGTTAAAAAAACTTGCAGCATGATTTCTTTTGATATAATACATTAAGGATCAGGGgcaatcaaaacacacacacaaaaaaagtgtcCAGAGAGAGCAGAATCTTGTTATATACTTAAAGTGATTATAAAATAATATTAAGGACATGGCTCAATTGACTTTCAGCTTTAACTAACCTTCAACTGTTGAGCAATGATATcgaagaaaaaacaacaactatgTGGCTAAAACTTCCTTTTGTAAAATCATTTGGTACCTTGAAACTACACATCTGGAACCAAATCCAAATATTCCCTACCATCTACCATGTCTCATTTTACAGTGTAATAATATTTGAATACGATGACACATCAATCACAGAACATCCTTCTCTTCTACAAAGAAATGTTTCCTTTGTAACAGTCAAATAAAGTGACAAAGCAACTCTCCAACATTAATAGGACACTTCACGGGCAAAACATCCCAGTTCCCTTTGTCTGACGAAGACAAACATATTGGAAAGGTTGGACAGTAATGATCAGCTGAGAGAAATAAGAAGCTTCTGCATATGTGCGGAATTCTCTTCTTTACGTACAGTCTCCGCTCTACTCATAGAGAACAGGCTGCTCTGCTCTGGTGAACGGGGCTTTATTACTAcagttagatcaaagctgaatcaatgtctgcaACATCACATAATGATAGTGTTCAACATAACAGGGCCAAATATAATAGCATAGTATAACGTTACTGTAAGACAAGACAAAAAACACCTAATTCCGTATGAGATTTTAAGATGATTGTGTGAAGGGTCGGATTTTTCTCTCATGTGGCCAAAACACAAGTGTGCTCCACTTGGCATTATATTTGCTTTGATTGAAACTAAGTACCGTCTGCTCTAAAAGTCAATCACTGTACATAATTCTAAACAACACGGTATAAGAAGATCTAAATGCatatccccatgaaactgattgagatcacAAGGTTGGTATGCAGATTCTGCATGGGCATTTCACCGGTAAAAATGAAAGAATTATCATTCACGATGGACAGTGAGAaatgtgaagggggggggggttctgtatTAAAAGAGCAGAGActgtgagtagagtagagaatcACACACATGCGCAGAAGCTTCGGGACCTTTAGCTGTCAGAACGGAGGGTCGAGAAATGTCGGATTCGCAGCCTCGGCCTAGAAAACAAACAACACATTTGAGATCCGTGGCCATTTTGCTGGTTTTGTCATTTTATCACAGGACACTCAAGTATATTTTCCCAGGAGATGAGGCTCACATTACAAATATGAATCAACCAGCTAATGTATGCTTGGCGTTTTATTTGCGAGGGGTTGAAAAGCAATATATGGTGAGGGCAAGCTGCCCACTGTAACTCTATAGATGGATACGGCACAAGGagcagtaatagcagcagtgagagagagagagagagagagagagagagagagagagagagagagagagagagggagagagagagagagagagagagagagagagagagaccacggaGATCTAACACTCAGAATGGAGAAGGCCTAGCTGACAGTAACAACACATCACGTCTTTGTCCAATGAAAAGCATCCGGGAAGACCAGTCACTTTGGGTAACTTTTTCCACTCCTTCCTTCAAAAGCACATTCTGGAGCACTATTACTCATTCTCTAGCCCTCCATTCTTCCCCTTCATGCCAAGGCAGGCACGTTCACTCGTCATCAAATGTTTGTTGGAGCAGAAAATTGGCAGCTAGATTCTCGTTCTTCTCACATGCAAAATATGCTTGAATGACAAGTCCCTCTGGAAATCCCA

Function

NR:

description
PREDICTED: UV excision repair protein RAD23 homolog B-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU478484 False 2384 lncRNA 0.40 2 59928035 59930514
TU478485 True 2402 lncRNA 0.40 2 59928035 59930514

Neighbor

gene id symbol gene type direction distance location
LOC118964630 NA coding downstream 13759 59904845 ~ 59914276 (-)
LOC110524194 LOC106613679 coding downstream 126831 59787744 ~ 59801204 (-)
LOC110524193 LOC106613676 coding downstream 151379 59772761 ~ 59776656 (-)
LOC110524192 LOC106613675 coding downstream 173216 59745476 ~ 59754819 (-)
cope LOC106613672 coding downstream 213934 59710615 ~ 59714101 (-)
klf2a LOC106613686 coding upstream 48493 59979007 ~ 59981619 (-)
LOC110524206 ap1m1 coding upstream 186016 60116530 ~ 60134272 (-)
LOC110524209 LOC106613694 coding upstream 351860 60282374 ~ 60289431 (-)
lpl lpl coding upstream 367690 60298204 ~ 60306640 (-)
LOC110524214 LOC106613699 coding upstream 464510 60395024 ~ 60398862 (-)
G422254 NA non-coding downstream 5401 59922186 ~ 59922634 (-)
G422207 NA non-coding downstream 8584 59848698 ~ 59919451 (-)
G422208 calr3 non-coding downstream 10145 59915629 ~ 59917890 (-)
G422206 NA non-coding downstream 81822 59845991 ~ 59846213 (-)
G422286 NA non-coding upstream 69652 60000166 ~ 60000436 (-)
G422294 NA non-coding upstream 84353 60014867 ~ 60015099 (-)
G422335 NA non-coding upstream 150181 60080695 ~ 60085314 (-)
G422342 NA non-coding upstream 164012 60094526 ~ 60094803 (-)
G422346 NA non-coding upstream 169622 60100136 ~ 60100372 (-)
lsg1 lsg1 other downstream 789778 59131152 ~ 59138429 (-)
G420982 LOC106613655 other downstream 891736 59026103 ~ 59036299 (-)
G420421 NA other downstream 1513892 58413128 ~ 58414143 (-)
G420193 NA other downstream 1813975 58112387 ~ 58114060 (-)
G419714 NA other downstream 2222099 57699745 ~ 57705936 (-)
G422347 NA other upstream 170251 60100765 ~ 60101056 (-)
LOC110524239 LOC106573579 other upstream 1128480 61058949 ~ 61081864 (-)
G424474 NA other upstream 1686356 61616870 ~ 61617244 (-)
G424499 LOC106613729 other upstream 1719453 61649967 ~ 61651775 (-)
G424502 NA other upstream 1728519 61659033 ~ 61659585 (-)

Expression


Co-expression Network