G421748


Basic Information

Item Value
gene id G421748
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 60009355 ~ 60009830 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU477907
atatatatacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaagatgtaaaactgtatttttttgtgaagaatcaacaacaatcatgaagtggaacgacatttattggatatttcaaacttttttaacaaatcaaaaactgaaagattgggcgtgcaaaattattcagcccccttaagttaatactttgtagcgccaccttttgctgcgattacagctgtaagtcgcttggggtatgtctctatcagttttgcacatcgagagaaattttttcccattcctccttgcaaaacagctcgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttctttccacagattctcgattggattcaggtctggactttgacttggccattctaacacctggatatgtttatttttgaaccattccattg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU477907 True 476 lncRNA 0.39 1 60009355 60009830

Neighbor

gene id symbol gene type direction distance location
LOC110524202 NA coding upstream 40409 59930644 ~ 59968946 (+)
LOC110524200 LOC106613684 coding upstream 78812 59920588 ~ 59930543 (+)
LOC110524201 LOC106613685 coding upstream 89179 59915582 ~ 59920176 (+)
LOC110524198 LOC106613681 coding upstream 105321 59889619 ~ 59904034 (+)
LOC110524197 LOC106613680 coding upstream 128786 59869690 ~ 59880569 (+)
malt2 LOC106613687 coding downstream 123406 60133236 ~ 60161934 (+)
LOC110524208 LOC106613692 coding downstream 155778 60165608 ~ 60180274 (+)
LOC118964531 NA coding downstream 213967 60223797 ~ 60267847 (+)
LOC110524211 tpm4 coding downstream 358561 60368391 ~ 60395175 (+)
LOC110524213 LOC106613698 coding downstream 389160 60398990 ~ 60407448 (+)
G421731 NA non-coding upstream 21045 59988021 ~ 59988310 (+)
G421677 NA non-coding upstream 150890 59853434 ~ 59858465 (+)
G421673 NA non-coding upstream 164334 59844379 ~ 59845021 (+)
G421672 NA non-coding upstream 168047 59840540 ~ 59841308 (+)
LOC110524196 LOC106613678 non-coding upstream 171147 59827075 ~ 59838227 (+)
G421788 NA non-coding downstream 68060 60077890 ~ 60078373 (+)
G421799 NA non-coding downstream 78802 60088632 ~ 60089109 (+)
G421806 NA non-coding downstream 87933 60097763 ~ 60097995 (+)
G421811 NA non-coding downstream 99772 60109602 ~ 60109909 (+)
G421814 NA non-coding downstream 102805 60112635 ~ 60112855 (+)
G420634 NA other upstream 1065138 58942728 ~ 58944217 (+)
G420117 LOC100846954 other upstream 1592579 58411240 ~ 58418268 (+)
G419452 NA other upstream 2109707 57884380 ~ 57899648 (+)
LOC110524119 LOC106613607 other upstream 2642018 57352343 ~ 57367627 (+)
LOC100135807 LOC106613594 other upstream 3051190 56943838 ~ 56958165 (+)
LOC110524226 LOC106573564 other downstream 684427 60694220 ~ 60695905 (+)
G423922 NA other downstream 1711707 61721537 ~ 61722024 (+)
G424079 NA other downstream 2095693 62105523 ~ 62105872 (+)
LOC110524265 LOC106613745 other downstream 2273322 62283054 ~ 62327772 (+)
G425224 NA other downstream 3035260 63045090 ~ 63051530 (+)

Expression


Co-expression Network